Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq950 123 6e-23 seq70 114 3e-20 seq1183 105 2e-17 seq623 104 5e-17 seq1068 95.1 3e-14 >seq950 Length=836093 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || |||||||| |||||||| ||||| || || ||||| || ||||| | | |||| Sbjct 302161 AGCCTGAGGACGAGATGAAGTGTAGATTCCTTCTGGATATTATAATCAGAGAGGGTTCGG 302220 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || || || ||||| || | ||||||||| | | ||||||||| Sbjct 302221 CCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCTTCC 302280 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || ||| ||| |||| | | || || || ||||| | |||| Sbjct 302281 TTGTCTTGGATCTTGGCTTTCACATTCTCAATCGTATCAGATGCTTCCACTTCTAAAGTA 302340 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||| |||||||| | |||||| Sbjct 302341 ATGGTCTTGCCAGTCAGAGTTTTCACGAAAATCTGCAT 302378 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| ||||||||||| || | ||||||| |||||||| || || || || |||| Sbjct 301961 CTTTCTGGATGTTGTAGTCCGACAAAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGA 302020 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | || | ||||||||| | | || |||||||| ||||| || || ||| ||| ||| Sbjct 302021 TCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGCTTTCACATTCT 302080 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | ||||| ||| ||||| | |||||| |||||||| || | || || |||| Sbjct 302081 CAATCGTATCTGATGCCTCCACTTCCAAAGTAATCGTTTTGCCTGTCAAGGTTTTGACGA 302140 Query 152095 AGACCTGCAT 152104 | | |||||| Sbjct 302141 ATATCTGCAT 302150 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| || || ||||||||||| ||||| || ||||| | | |||| ||||| Sbjct 297494 AGCACAAGGTGGAGTGTAGACTCTTTCTGGATATTATAATCTGAGAGGGTTCGGCCATCC 297553 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| || | ||||||||| | | || ||||| || || Sbjct 297554 TCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCC 297613 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| || |||| | | || ||| ||||||||| |||||||| ||| Sbjct 297614 TGGATCTTGGCTTTCACGTTCTCAATTGTATCAGAAGCCTCTACTTCCAGAGTAATGGTT 297673 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | || || || || | |||||| Sbjct 297674 TTTCCTGTCAAGGTTTTGACAAATATCTGCAT 297705 >seq70 Length=429657 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || ||||| |||||||||||||| | ||| || | ||||| || | Sbjct 142556 CAAG-TGCAGGGTTGATTCTTTATGGATGTTGTAATCTGATAAGGTGCGGCCATCCTCCA 142498 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || || || | | || || | | | ||||||||||| || |||| Sbjct 142497 ATTGCTTGCCAGCAAAAATTAAACGTTGTTGATGAGGAGGAATTCCTTCCTTGTCCTGAA 142438 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 ||||| |||| | | || ||| |||| || || |||||||||||||| ||||| | Sbjct 142437 TTTTTCGTTTCAAGTTTTCAACGGTGTCAGATGGTTCAACTTCAAGAGTAATGGTTTTTC 142378 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | |||||||||||||| ||||| ||||| Sbjct 142377 CAGTGAGAGTCTTCACAAAGACTTGCAT 142350 >seq1183 Length=31732 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || ||||| |||||||||||||| | ||| || | |||||||| | Sbjct 15673 CAAG-TGGAGGGTGGATTCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCATCTTCCA 15731 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || |||||||| | |||||| || | | ||| |||||||| || || | Sbjct 15732 ATTGCTTGCCAGCAAAGATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCCTGCA 15791 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || | | |||| | | | || | |||||| || ||||| || || || | Sbjct 15792 GCTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCC 15851 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||||||||| | |||||| Sbjct 15852 CTGTCAGGGTCTTCACGAAAATCTGCAT 15879 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || |||| |||||||||||||| | ||| || | |||||||| | Sbjct 15445 CAAG-TGCAGGGTTGATCCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCATCTTCCA 15503 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || || ||||| | |||||| || | | ||| |||||||| || || | Sbjct 15504 ATTGCTTGCCAGCAAACATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCCTGCA 15563 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || | | |||| | | | || | |||||| || ||||| || || || | Sbjct 15564 GCTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCC 15623 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || |||||||| || | |||||| Sbjct 15624 CTGTCAGGGTCTTCACAAAAATCTGCAT 15651 >seq623 Length=111817 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| || || || ||||| |||||||||||||| | ||| || | ||||| Sbjct 107663 AGAACCAAATGCAGGGTTGATTCTTTCTGGATGTTGTAATCTGATAAGGTACGGCCATCC 107722 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || |||||||| | ||||||| | | | ||| |||||||| || Sbjct 107723 TCCAATTGCTTGCCAGCAAAGATAAGTCGCTGCTGGCCAGGAGGGATACCTTCCTTGTCC 107782 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| ||| || |||| | | | || | |||||| || ||||| || || Sbjct 107783 TGGATCTTTGCTTTCACGTTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTC 107842 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| || | |||||| Sbjct 107843 TTCCCTGTCAGGGTCTTCACAAAAATCTGCAT 107874 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 151998 ATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACT 152057 ||||||||||| || ||||||||| ||| || | || | | |||| || | || ||| Sbjct 110413 ATTCCTTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATGGTGTCAGACGTTTCCACT 110472 Query 152058 TCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| |||| ||||| || |||||||||||||| |||| ||||| Sbjct 110473 TCAAGAATAATGGTTTTTCCAGTGAGAGTCTTCACAAAGATTTGCAT 110519 >seq1068 Length=143541 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || || || | ||| |||||||||||||| | |||||| | ||||| || | Sbjct 133796 ATGCAGGGTTGATTATTTCTGGATGTTGTAATCTGATAAAGTGCGGCCATCCTCCAATTG 133855 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || || |||| ||| | || |||||| | | ||| ||||||||||| || | || Sbjct 133856 CTTGCCAGCAAAGACAAGTCGCTACTGGTCAGGGGGGATACCTTCCTTTTCCTGGAGCTT 133915 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACT--CTCTACTTCAAGAGTAATAGTTTTGCCC 152078 | || ||| |||| | | || | | || |||||| || ||||| || || || || Sbjct 133916 TGCCTTTACATTCTCAATG--GTATTAGCTTGCTCTACCTCCAGAGTGATGGTCTTCCCT 133973 Query 152079 GTGAGAGTCTTCACGAAGACCTGCA 152103 || || |||||||| || | ||||| Sbjct 133974 GTCAGGGTCTTCACAAAAATCTGCA 133998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153352730237202