Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1183 113 3e-20 seq950 109 4e-19 seq623 109 4e-19 seq70 100 2e-16 seq352 84.2 2e-11 >seq1183 Length=31732 Score = 113 bits (124), Expect = 3e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | ||| |||| ||| || ||| || || |||||||||||||| Sbjct 15649 CATACCACCACGCAGACGCAATACCAAGTGGAGGGTGGATTCTTTCTGGATGTTGTAATC 15708 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | ||| | || |||| ||||| || |||||||| | |||||||| || | Sbjct 15709 TGATAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATAAGTCGCTGCTGCTCAGG 15768 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||||||| ||| | ||| | ||| | | | ||||| || || | || Sbjct 15769 GGGGATACCTTCCTTGTCCTGCAGCTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTC 15828 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| || || ||||| || || |||||||||||||| || |||||| Sbjct 15829 TACCTCCAGAGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCATG 15880 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/203 (70%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 44145 TCTCCTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCA 44203 || ||||| || || ||||| || | |||| || || || | || |||||| || ||| Sbjct 17234 TCACCTTTCTGTATATTGTAGTCAGAGAGTGTACGATCATCTTTCAACTGCTTTCCTGCA 17293 Query 44204 AAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAAT 44263 || | || || || ||||| || || | |||||||||||| || | || |||| Sbjct 17294 AAATTTAATCGTTGTTGATCAGAGGGAATTCCTTCCTTTTCCTCTAGATGTTGTTTCACG 17353 Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | |||||||| | | ||| || || | ||| || ||||| ||||| || ||| Sbjct 17354 TTTTCAATGGTGTCTGAAGGTTCAACTTCAAGAGTACAGGTTTTTCCAGTGAGAGTTTTC 17413 Query 44324 ACGAAGATTTGCATGATGTGAAT 44346 || ||||||||||| ||| ||| Sbjct 17414 ACAAAGATTTGCATTCTGTCAAT 17436 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 44147 TCCTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||||||||| | | ||| | || |||| ||||| || ||||| Sbjct 15460 TCCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAA 15519 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | |||||||| || | || | ||||||||| ||| | ||| | ||| | | Sbjct 15520 CATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCCTGCAGCTTTTTCTTTAGATT 15579 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | ||||| || || | || ||||||| || || ||||| || || ||||||||||| Sbjct 15580 CTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCCTGTCAGGGTCTTCAC 15639 Query 44326 GAAGATTTGCAT 44337 || || ||||| Sbjct 15640 AAAAATCTGCAT 15651 >seq950 Length=836093 Score = 109 bits (120), Expect = 4e-19 Identities = 168/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| || || | || || ||||| || ||||| ||||| || ||||| Sbjct 302148 CATGCCACCTCGAAGCCTGAGGACGAGATGAAGTGTAGATTCCTTCTGGATATTATAATC 302207 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| || | || ||||||||||| || |||||||||| |||||||| |||| Sbjct 302208 AGAGAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGG 302267 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| || ||||| |||| | ||| | || || || | | || Sbjct 302268 TGGAATTCCTTCCTTGTCTTGGATCTT-GGCTTTCACATTCTCAATCGTATCAGATGCTT 302326 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342 |||| || | ||||| ||||| || || || || |||||||| || |||||||||| Sbjct 302327 CCACTTCTAAAGTAATGGTCTTGCCAGTCAGAGTTTTCACGAAAATCTGCATGATGT 302383 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || ||| || ||||| || ||||| | ||| || | || || Sbjct 297496 CACAAGGTGGAGTGTAGACTCTTTCTGGATATTATAATCTGAGAGGGTTCGGCCATCCTC 297555 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || |||||||||| |||||||| |||| || | ||||| || ||| Sbjct 297556 CAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCCTG 297615 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| |||| | |||| | || || || | | || || |||| ||||| || | Sbjct 297616 GATCTT-GGCTTTCACGTTCTCAATTGTATCAGAAGCCTCTACTTCCAGAGTAATGGTTT 297674 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || | ||| || || || || |||||| Sbjct 297675 TTCCTGTCAAGGTTTTGACAAATATCTGCATG 297706 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/195 (72%), Gaps = 7/195 (4%) Strand=Plus/Plus Query 44148 CCTTT-TGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 ||||| ||||||||||| || | | ||| | || | || ||||||||||| || |||| Sbjct 301960 CCTTTCTGGATGTTGTAGTCCGACAAAGTTCG-GC-CATCTTCCAGCTGCTTGCCAGCAA 302017 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 |||||| |||||||| |||| || | |||||||| || ||||| |||| | Sbjct 302018 AGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATCTT-GGCTTTCACA 302076 Query 44265 TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 ||| | || || || | | ||||| |||| |||||||| || || || | ||| || Sbjct 302077 TTCTCAATCGTATCTGATGCCTCCACTTCCAAAGTAATCGTTTTGCCTGTCAAGGTTTTG 302136 Query 44324 ACGAAGATTTGCATG 44338 ||||| || |||||| Sbjct 302137 ACGAATATCTGCATG 302151 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| || || || || || ||| |||||||||| ||| ||| | || ||| Sbjct 300667 ACCAGATGGAGTGTTGATTCTTTCTGGTTGTTGTAATCC---AGTGTGCGTCCATCCTCC 300723 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| ||||| ||||| | || | ||||| || ||| Sbjct 300724 AGCTGCTTGCCAGCAAAGATCAGTCGCTGTTGATCAGGTGGAATTCCTTCTTTGTCCTGA 300783 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| || ||| | || || || | | || || |||| || || ||||| Sbjct 300784 ATCTT-GGCTTTAACATTCTCAATCGTATCAGAAGCCTCTACTTCCAATGTGATTGTCTT 300842 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| || ||||| ||||| Sbjct 300843 GCCTGTCAGAGTCTTAACAAAGATCTGCAT 300872 >seq623 Length=111817 Score = 109 bits (120), Expect = 4e-19 Identities = 149/204 (73%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 44145 TCTCCTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCA 44203 || ||||| || || ||||| || | ||| || | || |||| |||||| || ||| Sbjct 110326 TCACCTTTCTGTATATTGTAGTCAGAAAGTGTACGACCATCTTCCAACTGCTTTCCTGCA 110385 Query 44204 AAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAAT 44263 || || ||||| || ||||| | ||| | |||||||| ||| || || ||||| || Sbjct 110386 AAAATTAAACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCCTGAATTTT-TGCTTTAAC 110444 Query 44264 GTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTT 44322 ||| | |||||||| | | |||||| || | |||| || ||||| ||||| ||||| Sbjct 110445 GTTTTCAATGGTGTCAGACGTTTCCACTTCAAGAATAATGGTTTTTCCAGTGAGAGTCTT 110504 Query 44323 CACGAAGATTTGCATGATGTGAAT 44346 ||| ||||||||||| ||| ||| Sbjct 110505 CACAAAGATTTGCATCCTGTCAAT 110528 Score = 102 bits (112), Expect = 6e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || || |||||||||||||| | | || | || |||| ||||| || |||||| Sbjct 107684 TCTTTCTGGATGTTGTAATCTGATAAGGTACGGCCATCCTCCAATTGCTTGCCAGCAAAG 107743 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | |||||||| | | ||| | ||||||||| ||| ||||| ||||| | ||| Sbjct 107744 ATAAGTCGCTGCTGGCCAGGAGGGATACCTTCCTTGTCCTGGATCTT-TGCTTTCACGTT 107802 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || || | || ||||||| || || ||||| || || ||||||||||| Sbjct 107803 CTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCCTGTCAGGGTCTTCAC 107862 Query 44326 GAAGATTTGCATG 44338 || || |||||| Sbjct 107863 AAAAATCTGCATG 107875 >seq70 Length=429657 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || || || |||||||||||||| | | ||| | || ||| Sbjct 142558 ACCAAGTGCAGGGTTGATTCTTTATGGATGTTGTAATCTGATAAGGTGCGGCCATCCTCC 142499 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||| || ||||| || ||||| || |||| | ||| | |||||||| ||| Sbjct 142498 AATTGCTTGCCAGCAAAAATTAAACGTTGTTGATGAGGAGGAATTCCTTCCTTGTCCTGA 142439 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || | ||||| || | | |||||| | | ||| || || | ||||| || ||| Sbjct 142438 ATTTTTCGTTTCAAGTTTTCAACGGTGTCAGATGGTTCAACTTCAAGAGTAATGGTTTTT 142379 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAAT 44346 || ||||| |||||||| |||| |||||| ||| ||| Sbjct 142378 CCAGTGAGAGTCTTCACAAAGACTTGCATCCTGTCAAT 142341 >seq352 Length=269356 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || |||| |||||| || ||||| || ||||| || ||||| | || | |||||||| Sbjct 29340 TCTTCCAACTGCTTTCCTGCAAAAATTAAACGTTGTTGATCAGGGGGAATTCCTTCCTTG 29399 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 || | | || | |||| | | |||||||| | |||||| || | |||| Sbjct 29400 TCGTTGAGTTTGCGTTTCACGTCTTCAATGGTGTCAAACGTTTCCACTTCAAGAGTAACG 29459 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAAT 44346 || ||||| ||||| |||||||| ||||||||||| ||| ||| Sbjct 29460 GTTTTTCCAGTGAGAGTCTTCACAAAGATTTGCATCCTGTCAAT 29503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359851486679454