Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq204 102 7e-17 seq1338 84.2 2e-11 seq117 84.2 2e-11 >seq204 Length=107262 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| |||| || ||||| || || || ||||| || || ||||| ||||||| Sbjct 82274 ACCAGATGGAGAGTTGACTCCTTCTGGATATTGTAGTCCGACAGCGTGCGGCCATCCTCG 82333 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||| || |||| | | ||||||||| ||||| || |||||||||||| | Sbjct 82334 AGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCAGGAGGGATTCCCTCCTTGTCTTGA 82393 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||| | |||||| || | || | ||| || Sbjct 82394 ATCTTGGCCTTCACGTTCTCAATTGTGTCTGACGCCTCGACTTCTAACGTGATCGTCTTC 82453 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || |||||||| |||||||| Sbjct 82454 CCAGTAAGGGTCTTTACAAAGATCTGCAT 82482 Score = 82.4 bits (90), Expect = 7e-11 Identities = 100/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCT 118665 |||| | ||||||||||| ||||| || || || |||||| ||||| || || | Sbjct 85980 AGATCAAGCGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACAT 86039 Query 118666 GTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTT 118724 || | |||||||| ||| |||||| |||| ||| | |||||| || || || ||||| Sbjct 86040 TCTCAATGGTGTCCGATGC-CTCGACTTCGAGGGTAATCGTTTTTCCAGTAAGCGTTTTA 86098 Query 118725 ACAAAAATCTGCAT 118738 || ||||| ||||| Sbjct 86099 ACGAAAATTTGCAT 86112 >seq1338 Length=4677894 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 118599 CCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGT 118658 |||||| ||||||||||||||||||| || || || |||||||||||| || || Sbjct 229760 CCAGCGAAGATGAGACGCTGCTGATCAGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCC 229701 Query 118659 TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGA 118718 || || | |||| ||||||| | || ||||||| || | || || || || ||| Sbjct 229700 TTCACATTCTCGATCGTGTCCGAGGCTTCAACCTCGAGCGTGATTGTCTTCCCCGTGAGA 229641 Query 118719 GTTTTTACAAAAATCTGCATGGCT 118742 || || || || || |||||| || Sbjct 229640 GTCTTCACGAAGATTTGCATGACT 229617 >seq117 Length=131150 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 118599 CCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGT 118658 ||||| |||| || || ||||||||||| || || ||||| |||||| |||||| Sbjct 13991 CCAGCAAAGATAAGTCGTTGCTGATCGGGTGGGATTCCCTCTTTGTCTTGAATTTTCGCC 14050 Query 118659 TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGA 118718 || || | ||| | || |||| | || ||||| | ||| | |||||| || || || Sbjct 14051 TTTACATTTTCAATTGTATCCGAGGCTTCCACCTCAAGGGTGATCGTTTTTCCAGTAAGT 14110 Query 118719 GTTTTTACAAAAATCTGCATG 118739 ||||| || || ||||||||| Sbjct 14111 GTTTTCACGAAGATCTGCATG 14131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433821221233312