Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq204 89.7 4e-13 seq117 82.4 6e-11 >seq204 Length=107262 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| || |||||||| ||| ||| | || || || || |||||||| || Sbjct 82291 CTCCTTCTGGATATTGTAGTCCGACAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAA 82350 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| || || ||||| | ||||||||||| ||| || ||| || Sbjct 82351 GATCAACCTCTGCTGATCAGGAGGGATTCCCTCCTTGTCTTGAATCTTGGCCTTCACGTT 82410 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| |||| || || | || |||||||| || || || ||||| || Sbjct 82411 CTCAATTGTGTCTGACGCCTCGACTTCTAACGTGATCGTCTTCCCAGTAAGGGTCTTTAC 82470 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 82471 AAAGATCTGCAT 82482 >seq117 Length=131150 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256 ||||| || || | ||||| ||||| || || | ||||| |||||| |||||| Sbjct 12179 CCGGCAAAGATAAGGCGCTGCTGGTCCGGTGGAATCCCCTCTTTGTCCTGGATTTTTGCT 12238 Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316 || || | | | ||||| | ||||||| |||| ||| || ||||| || ||||| Sbjct 12239 TTGACGTTCTCGATAGTGTCCGAAGCCTCCACTTCCAGGGTGATGGTCTTTCCTGTCAGC 12298 Query 45317 GTCTTCACAAAGATTTGCAT 45336 |||||||| ||||||||||| Sbjct 12299 GTCTTCACGAAGATTTGCAT 12318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395066841196456