Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq204 111 1e-19 seq117 104 2e-17 >seq204 Length=107262 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| || | ||| || ||||| || | || || || || ||| | |||||| Sbjct 82274 ACCAGATGGAGAGTTGACTCCTTCTGGATATTGTAGTCCGACAGCGTGCGGCCATCCTCG 82333 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| |||||| ||||||| || || |||||||| ||||| || || || ||||| | | Sbjct 82334 AGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCAGGAGGGATTCCCTCCTTGTCTTGA 82393 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | | ||||| | ||||| || | |||||| || || Sbjct 82394 ATCTTGGCCTTCACGTTCTCAATTGTGTCTGACGCCTCGACTTCTAACGTGATCGTCTTC 82453 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || || |||||||||||||| Sbjct 82454 CCAGTAAGGGTCTTTACAAAGATCTGCAT 82482 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 |||| || |||| |||||||| || ||||| ||||| ||||| | ||||| ||||||| Sbjct 83555 CAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCCTTGTCTTGGATTTTAGCCTTGA 83614 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 | ||| |||||||| || || || | |||||||||||| || || || || | Sbjct 83615 CATTTTCGATAGTGTCAGACGCCTCCACTTCGAGCGTGATGGTTTTGCCGGTGAGCGTCT 83674 Query 94992 TCACAAAGATCTGCATGC 95009 | |||||||| ||||||| Sbjct 83675 TGACAAAGATTTGCATGC 83692 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 ||||||| || | ||||||||||||||||| ||||||||||| | ||||| ||||||| Sbjct 85977 CAAAGATCAAGCGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTTAGCCTTGA 86036 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 | | | ||||| | ||||| || | || || |||||||||||||| |||| Sbjct 86037 CATTCTCAATGGTGTCCGATGCCTCGACTTCGAGGGTAATCGTTTTTCCAGTAAGCGTTT 86096 Query 94992 TCACAAAGATCTGCAT 95007 | || || || ||||| Sbjct 86097 TAACGAAAATTTGCAT 86112 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 94874 AAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 ||||||| || ||||| |||||||| || ||||||||||| | || |||||||| || Sbjct 82654 AAGATTAGTCGCTGCTGGTCTGGAGGGATTCCTTCTTTGTCCTGGATCTTTGCCTTTACA 82713 Query 94934 GCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTC 94993 | | ||||||| || || |||| |||||| || || || || || || ||| Sbjct 82714 TTTTCAATGGTGTCAGAAGCCTCCACCTCAAGCGTGATCGTCTTCCCGGTGAGGGTCTTC 82773 Query 94994 ACAAAGATCTGCAT 95007 |||||||||||||| Sbjct 82774 ACAAAGATCTGCAT 82787 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 ||||||||| || ||||| |||||||| || || || ||||| | ||| || || || | Sbjct 82946 CAAAGATTAGTCGCTGCTGGTCTGGAGGGATCCCCTCCTTGTCCTGAATCTTGGCTTTCA 83005 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 || ||| ||||||| ||||| || | ||||| |||||||| || || || | Sbjct 83006 CGTTCTCGATGGTGTCAGACGCTTCGACCTCCAGGGTGATAGTTTTTCCTGTGAGGGTCT 83065 Query 94992 TCACAAAGATCTGCAT 95007 |||||||||| ||||| Sbjct 83066 TCACAAAGATTTGCAT 83081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 94874 AAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 ||||||| || ||||| |||||||| || ||||| ||||| | || |||||||| || Sbjct 83926 AAGATTAGTCGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTTACA 83985 Query 94934 GCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTC 94993 | | ||||||| || || || | |||||||||||| || || || || || Sbjct 83986 TTTTCAATGGTGTCAGAAGCCTCCACTTCGAGCGTGATGGTTTTGCCGGTGAGCGTCTTG 84045 Query 94994 ACAAAGATCTGCATGC 95009 |||||||| ||||||| Sbjct 84046 ACAAAGATTTGCATGC 84061 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 94874 AAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 || || | || |||||| || ||||| ||||| |||||||| | ||| || |||||||| Sbjct 85645 AAAATGAGTCGTTGCTGGTCAGGAGGGATACCCTCTTTGTCCTGAATCTTGGCCTTGACA 85704 Query 94934 GCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTC 94993 | | ||||| | | ||||| || | ||||| || |||||||| || || || Sbjct 85705 TTCTCAATGGTGTCGGAGGCCTCGACCTCGAGTGTGATCGTCTTTCCAGTGAGGGTCTTG 85764 Query 94994 ACAAAGATCTGCAT 95007 |||||||||||||| Sbjct 85765 ACAAAGATCTGCAT 85778 >seq117 Length=131150 Score = 104 bits (114), Expect = 2e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 ||||||| | || ||||||||| || || || || |||||||| | |||||| ||||| | Sbjct 13995 CAAAGATAAGTCGTTGCTGATCGGGTGGGATTCCCTCTTTGTCTTGAATTTTCGCCTTTA 14054 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 | | | || || | | || || |||| ||||| |||||||||||||| |||| Sbjct 14055 CATTTTCAATTGTATCCGAGGCTTCCACCTCAAGGGTGATCGTTTTTCCAGTAAGTGTTT 14114 Query 94992 TCACAAAGATCTGCATGCTTACAAC 95016 |||| |||||||||||||| | ||| Sbjct 14115 TCACGAAGATCTGCATGCTGAAAAC 14139 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 || ||| ||||||| | || ||||||||||| || || ||||| ||||| | ||| ||| Sbjct 11127 TTACCGGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCCTTGTCTTGAATCTTT 11186 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTA 94984 ||||| ||| | | |||||| | ||||| || | |||||||||||||| || Sbjct 11187 GCCTTTACGTTCTCAATAGTGTCCGAAGCTTCGACCTCCAAGGTGATGGTTTTTCCCGTC 11246 Query 94985 AGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| ||||||||||| Sbjct 11247 AGCGTCTTCACGAAGATCTGCAT 11269 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 || ||| ||||||| | | |||||| ||||| || || ||||| ||||| | ||||| Sbjct 13233 TTACCGGCAAAGATAAGGCGTTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATTTTG 13292 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTA 94984 ||||| ||| | | ||||| | | ||||| || | |||||||| |||||||| Sbjct 13293 GCCTTTACGTTCTCAATGGTGTCCGAGGCTTCGACCTCCAGGGTGATGGTCTTTCCAGTC 13352 Query 94985 AGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||| Sbjct 13353 AGCGTCTTGACGAAGATCTGCAT 13375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448281472080960