Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq204 98.7 9e-16 >seq204 Length=107262 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| ||||| |||| || |||||||| || ||||| |||||||||||||| |||||| Sbjct 85969 CTTACCTGCAAAGATCAAGCGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTT 86028 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 ||||| | ||| | || || | | ||||| |||| ||||| ||||| || || Sbjct 86029 AGCCTTGACATTCTCAATGGTGTCCGATGCCTCGACTTCGAGGGTAATCGTTTTTCCAGT 86088 Query 131211 TAGAGTTTTTACGAAAATCTGCAT 131234 || ||||| |||||||| ||||| Sbjct 86089 AAGCGTTTTAACGAAAATTTGCAT 86112 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | ||| | || |||||||| || || ||||| || Sbjct 82255 GCCTCCACGGAGACGAAGAACCAGATGGAGAGTTGACTCCTTCTGGATATTGTAGTCCGA 82314 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| |||||||| || || |||| || | |||||| || ||||| Sbjct 82315 CAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCAGGAGG 82374 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||| || ||||| || || ||| | | ||| | || || | | ||||| Sbjct 82375 GATTCCCTCCTTGTCTTGAATCTTGGCCTTCACGTTCTCAATTGTGTCTGACGCCTCGAC 82434 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || ||||| || |||||||| Sbjct 82435 TTCTAACGTGATCGTCTTCCCAGTAAGGGTCTTTACAAAGATCTGCAT 82482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472002557322240