Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1367 109 4e-19 seq1522 100 2e-16 seq1347 86.0 4e-12 seq1095 86.0 4e-12 seq1048 82.4 5e-11 seq811 82.4 5e-11 >seq1367 Length=1568206 Score = 109 bits (120), Expect = 4e-19 Identities = 72/80 (90%), Gaps = 5/80 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 1567624 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGTTAGGGACAGTGGGAATCTCGT 1567683 Query 25957 TAATCCTTTCATGCGCGTCA 25976 |||||| ||||||||||||| Sbjct 1567684 TAATCCATTCATGCGCGTCA 1567703 >seq1522 Length=412789 Score = 100 bits (110), Expect = 2e-16 Identities = 79/95 (83%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG-----GGGGTAATCTCGT 25956 |||||||||| ||||||||| ||||||||||||||||| ||| | || |||||||| Sbjct 25642 AAGCCCGTTCACTTGGCTGTTGTTTCGCTAGATAGTAGTTAGACCCAGTGGGAATCTCGT 25583 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||| |||||||| || |||| |||||| Sbjct 25582 TAATCCAATCACGCGCGTCAGTAGTTAGCTGACGA 25548 >seq1347 Length=2877100 Score = 86.0 bits (94), Expect = 4e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 19954 TTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATA 20013 ||||||||||||| |||||||||||||| ||||||||| ||||||| ||||| ||| Sbjct 628035 TTCAAAGTTCTTTGCAACTTTCCCTCACAGTACTTGTTTGCTATCGAATTCGCGTCTATA 627976 Query 20014 TTTAGCCTTA 20023 |||||||||| Sbjct 627975 TTTAGCCTTA 627966 >seq1095 Length=1290 Score = 86.0 bits (94), Expect = 4e-12 Identities = 59/67 (88%), Gaps = 5/67 (7%) Strand=Plus/Minus Query 25915 TGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATG 25969 ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||| Sbjct 1290 TGGCTGTGGTTTCGCTAGATAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATG 1231 Query 25970 CGCGTCA 25976 ||||||| Sbjct 1230 CGCGTCA 1224 >seq1048 Length=1595 Score = 82.4 bits (90), Expect = 5e-11 Identities = 57/65 (88%), Gaps = 5/65 (8%) Strand=Plus/Minus Query 25917 GCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCG 25971 ||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| Sbjct 1595 GCTGTGGTTTCGCTAGATAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 1536 Query 25972 CGTCA 25976 ||||| Sbjct 1535 CGTCA 1531 >seq811 Length=5166 Score = 82.4 bits (90), Expect = 5e-11 Identities = 57/65 (88%), Gaps = 5/65 (8%) Strand=Plus/Plus Query 25917 GCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCG 25971 ||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| Sbjct 1 GCTGTGGTTTCGCTAGATAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 60 Query 25972 CGTCA 25976 ||||| Sbjct 61 CGTCA 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940113354616