Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq117 104 2e-17 seq204 95.1 1e-14 >seq117 Length=131150 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || || |||||| |||| ||||| |||||| || | Sbjct 14130 ATGCAGATCTTCGTGAAAACACTTACTGGAAAAACGATCACCCTTGAGGTGGAAGCCTCG 14071 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || |||||||||||||| ||||| || ||||||||||| Sbjct 14070 GATACAATTGAAAATGTAAAGGCGAAAATTCAAGACAAAGAGGGAATCCCACCCGATCAG 14011 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| ||||| ||||| || Sbjct 14010 CAACGACTTATCTTTGCTGG 13991 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || || ||||| || || |||| || |||||||| | | Sbjct 13045 ATGCAAATTTTCGTGAAGACATTGACCGGAAAGACTATCACGCTCGAAGTGGAGGCTTCA 12986 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||| || |||||||| ||||| |||||||| ||||| Sbjct 12985 GACACAATCGAAAATGTGAAAGCAAAGATCCAAGACAAAGAGGGAATTCCACCAGATCAG 12926 Query 22339 CAACGTCTTATATTTGCCGG 22358 || || ||||| |||||||| Sbjct 12925 CAGCGACTTATCTTTGCCGG 12906 >seq204 Length=107262 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || || || ||| |||| || || || || || || Sbjct 83389 ATGCAAATTTTTGTCAAGACCCTCACTGGAAAGACGATCACACTCGAGGTCGAGGCCTCC 83330 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||||||||||| || |||||||||||||| ||||| Sbjct 83329 GACACCATTGAGAATGTCAAGGCCAAAATTCAAGATAAAGAGGGTATTCCACCTGATCAG 83270 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| || || || || || Sbjct 83269 CAACGACTAATCTTCGCAGG 83250 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | ||||| ||||| |||| || |||||||| | | Sbjct 83690 ATGCAAATCTTTGTCAAGACGCTCACCGGCAAAACCATCACGCTCGAAGTGGAGGCGTCT 83631 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| ||||| ||||||||||| || |||||||| ||||| Sbjct 83630 GACACTATCGAAAATGTCAAGGCTAAAATCCAAGACAAGGAAGGAATTCCACCTGATCAG 83571 Query 22339 CAACGTCTTATATTTGCCGG 22358 || || | || ||||| || Sbjct 83570 CAGCGATTGATTTTTGCTGG 83551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419719119604840