Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1459 100 6e-16 seq1373 100 6e-16 seq1350 100 6e-16 seq1512 98.7 2e-15 seq1570 93.3 9e-14 seq1400 93.3 9e-14 >seq1459 Length=579274 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 72763 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 72822 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 72823 CCCCGCATCGGGC 72835 >seq1373 Length=1489643 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 617258 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 617317 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 617318 CCCCGCATCGGGC 617330 >seq1350 Length=2768065 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 2166377 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 2166436 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 2166437 CCCCGCATCGGGC 2166449 >seq1512 Length=435709 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 60298 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 60357 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 60358 CCCGCATCGGGC 60369 >seq1570 Length=344619 Score = 93.3 bits (102), Expect = 9e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 142497 TGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGG 142556 |||| |||||||||||||||||||||||||| | |||||||||||| | || ||||| Sbjct 87520 TGAGCAAGCCCGGTTAGCTCAGTCGGTAGAGCACCGGACTCTTAATCTGGCTGTGGTGGG 87579 Query 142557 TTCGAGCCCCACATCGGGC 142575 |||||||||| |||| ||| Sbjct 87580 TTCGAGCCCCGCATCAGGC 87598 >seq1400 Length=903158 Score = 93.3 bits (102), Expect = 9e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 217813 GCTGGCACCAAAAACTCTGGTCTCTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCC 217872 ||||| || || ||||| || || || || ||||| || |||||||||||||| Sbjct 138236 GCTGGAACGAAGAACTCGCAGCTGTGTACGCTTATCCTCACTGAGGGAGACTCAGCCAAA 138295 Query 217873 ACGCTGGCAACCGCTGGTCTTGCCGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTC 217932 || |||| ||||||||| ||||| ||| | || || |||||| | ||||| ||| Sbjct 138296 ACTTTGGCTGTTTCTGGTCTTGGTGTGGTCGGTAGAGACAGATATGGTGTATTCCCGCTC 138355 Query 217933 CGTGGTAAGCTGCTCAACGTGCGCGA 217958 |||||||||||| | || || ||||| Sbjct 138356 CGTGGTAAGCTGTTGAATGTTCGCGA 138381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027813938339976