Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq117 96.9 3e-15 seq204 82.4 8e-11 >seq117 Length=131150 Score = 96.9 bits (106), Expect = 3e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 |||||| | || || |||||||| || || |||||||| ||||| ||||| || ||| || Sbjct 12906 CCGGCAAAGATAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTGTCTTGGATCTTT-GC 12964 Query 64364 TTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAA 64422 ||| ||| || | ||| || || |||||||| | || | ||||| |||||||| Sbjct 12965 TTTCACATTTTCGATTGTGTCTGAAGCCTCCACTTCGAGCGTGATAGTCTTTCCGGTCAA 13024 Query 64423 AGTTTTTACGAAAATTTGCATT 64444 || || ||||||||||||||| Sbjct 13025 TGTCTTCACGAAAATTTGCATT 13046 Score = 82.4 bits (90), Expect = 8e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 |||||| | || || ||||||||||| || ||||| || ||||| || || | ||||||| Sbjct 12179 CCGGCAAAGATAAGGCGCTGCTGGTCCGGTGGAATCCCCTCTTTGTCCTGGA-TTTTTGC 12237 Query 64364 TTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAA 64422 ||| || ||| | || || || |||||||| | || | |||||| || |||| Sbjct 12238 TTTGACGTTCTCGATAGTGTCCGAAGCCTCCACTTCCAGGGTGATGGTCTTTCCTGTCAG 12297 Query 64423 AGTTTTTACGAAAATTTGCATT 64444 || || ||||| ||||||||| Sbjct 12298 CGTCTTCACGAAGATTTGCATT 12319 >seq204 Length=107262 Score = 82.4 bits (90), Expect = 8e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 64300 CTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||| || ||| | || | |||||||| || ||||||||||||||||| ||||| ||||| Sbjct 85969 CTTACCTGCAAAGATCAAGCGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTT 86028 Query 64360 TTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||| ||| ||| | || || || || ||||| | || | || || || || Sbjct 86029 AGCCTTGACATTCTCAATGGTGTCCGATGCCTCGACTTCGAGGGTAATCGTTTTTCCAGT 86088 Query 64420 CAAAGTTTTTACGAAAATTTGCATT 64444 | ||||| ||||||||||||||| Sbjct 86089 AAGCGTTTTAACGAAAATTTGCATT 86113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499633957707840