Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq204 125 2e-23 seq1338 86.0 1e-11 >seq204 Length=107262 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || |||||||| |||||||| |||| |||||||| | || || | ||||| Sbjct 82271 AGAACCAGATGGAGAGTTGACTCCTTCTGGATATTGTAGTCCGACAGCGTGCGGCCATCC 82330 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||| ||||| | | |||||| || ||| ||||| || || Sbjct 82331 TCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCAGGAGGGATTCCCTCCTTGTCT 82390 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| || | ||||||| | || || || |||||||||||| Sbjct 82391 TGAATCTTGGCCTTCACGTTCTCAATTGTGTCTGACGCCTCGACTTCTAACGTGATCGTC 82450 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| || || Sbjct 82451 TTCCCAGTAAGGGTCTTTACAAAGATCTG 82479 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC 199549 || |||||||| || ||||||||||| ||| ||||||||| ||||| |||||| | Sbjct 82648 CCTGCGAAGATTAGTCGCTGCTGGTCTGGAGGGATTCCTTCTTTGTCCTGGATCTTTGCC 82707 Query 199550 TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGA 199609 || || ||| | |||||| | | || || || | |||||||||||| || ||||| Sbjct 82708 TTTACATTTTCAATGGTGTCAGAAGCCTCCACCTCAAGCGTGATCGTCTTCCCGGTGAGG 82767 Query 199610 GTTTTCACAAAAATTTG 199626 || |||||||| || || Sbjct 82768 GTCTTCACAAAGATCTG 82784 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || ||||| || || || |||||||||| |||||| |||| |||||| Sbjct 85786 CGGAGTCGGAGCACCAGGTGAAGTGTGGATTCCTTTTGGATGTTGTAATCAGACAAAGTG 85845 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGC 199494 | ||||||||| ||||||||||| || Sbjct 85846 CGTCCATCTTCGAGCTGCTTTCCTGC 85871 >seq1338 Length=4677894 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC 199549 || |||||||||||||||||||| || || ||||| || || || ||||| | Sbjct 229760 CCAGCGAAGATGAGACGCTGCTGATCAGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCC 229701 Query 199550 TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGA 199609 ||||| |||| ||||| | | ||| || || | |||||| ||||| ||||||||| Sbjct 229700 TTCACATTCTCGATCGTGTCCGAGGCTTCAACCTCGAGCGTGATTGTCTTCCCCGTGAGA 229641 Query 199610 GTTTTCACAAAAATTTG 199626 || ||||| || ||||| Sbjct 229640 GTCTTCACGAAGATTTG 229624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178895377836312