Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq117 89.7 5e-13 seq204 87.8 2e-12 >seq117 Length=131150 Score = 89.7 bits (98), Expect = 5e-13 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| || ||||| || || || ||||||||| | || || ||||| | Sbjct 12319 AATGCAAATCTTCGTGAAGACGCTGACAGGAAAGACCATCACCCTGGAAGTGGAGGCTTC 12260 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| |||||||| ||||||||||| ||||| | |||| Sbjct 12259 GGACACTATCGAGAACG-TCAAAGCAAAAATCCAGGACAAAGAGGGGATTCCACCGGACC 12201 Query 38362 AACAGCGGCTCAT 38374 | ||||| || || Sbjct 12200 AGCAGCGCCTTAT 12188 >seq204 Length=107262 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || |||||||| |||||||||||||| |||| || ||||| | Sbjct 84059 ATGCAAATCTTTGTCAAGACGCTCACCGGCAAAACCATCACGCTCGAAGTGGAGGCTTCT 84000 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | ||| | || | ||| |||| ||||| || ||||| || | ||||| Sbjct 83999 GACACCATTGAAAATGTAAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCAGACCAG 83940 Query 38364 CAGCGGCTCATTTACGCGGGCAA 38386 ||||| || || | ||| || || Sbjct 83939 CAGCGACTAATCTTCGCAGGTAA 83917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500161946250240