Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1386 275 8e-69 seq1340 163 4e-35 seq1451 150 2e-31 >seq1386 Length=1167445 Score = 275 bits (304), Expect = 8e-69 Identities = 537/788 (68%), Gaps = 4/788 (1%) Strand=Plus/Plus Query 6953 CCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCA 7012 ||||| || ||||||| ||| || | || | || ||||| || | || | ||| Sbjct 148950 CCAAGTGAGAGAGGTGCCACATCAAGAAGCAGAAGATCTTGCACTGCCTCAGACTTGTCA 149009 Query 7013 CCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072 || | | ||| || |||||||| | || || || || || |||||||| ||||| ||| Sbjct 149010 CCGGAAAGGATAGCAGCTTGGACAGCGGCACCATAGGCAACGGCCTCATCAGGGTTGATC 149069 Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132 | || |||||||| || || || ||| || | || | |||| ||||||||| Sbjct 149070 GACTTGTTCAGTTCCTTTCCAGAGAAGAGATCAGAAAGCAGCTTCTGAACTTTCGGGATA 149129 Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT-TTATCGATCTTTGAGTC 7191 || || || || ||||||| ||||| |||| | | | | | || || ||||| | || Sbjct 149130 CGGGTGGAACCTCCGACCAGGACGATGTCATGGA-TCTGGCTCTTGTCCATCTTAGCATC 149188 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTC 7251 || || | ||| ||||| || ||||| |||||||| || || |||||||| Sbjct 149189 TCTCAGGGATTTCTCGACGGGGTCCATCGTGGAACGGAACAGATCGGCGCAAAGTTCCTC 149248 Query 7252 AAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTC 7311 ||| || || || || ||| || ||||| || | || ||| | | || || ||||| Sbjct 149249 AAAGCGGGCTCGAGTGATGTTAGTGTAGAAGTCGATACCCTCGAAGAGTGAGTCGATTTC 149308 Query 7312 AATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAA 7371 || | | || | | ||||| | || ||||| || || || || || || || | Sbjct 149309 GATAGAAGCCTGAGATGAGGAAGAGAGGGTACGCTTGGCACGTTCGCAAGCTGTGCGGAG 149368 Query 7372 ACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTC 7431 |||||| || ||||| |||||| | | ||||||||| || || || || |||||| | Sbjct 149369 ACGACGCAGAGCACGAGGGTTAGTGTTGAGATCTTTCTTGTGCTTGCGCTTGAACTCTGC 149428 Query 7432 AGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGC 7491 |||||| | | || ||||| ||||| || || | ||| ||||| || || Sbjct 149429 GACGAAGTGGTTGACCATTCGGTTGTCGAAGTCTTCTCCTCCAAGGTGAGTATCACCAGC 149488 Query 7492 GGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACC 7551 || | ||| ||||| ||||| || | || ||| | | | || |||||||| ||||| Sbjct 149489 AGTGGATTTTACTTCGAAGATTCCATCCTCGATGGTCAGGATGGACACATCAAAGGTACC 149548 Query 7552 ACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTA 7611 ||| || || || || ||||| ||||| || || ||||| ||||||||||| Sbjct 149549 ACCTCCAAGATCGAAGATGAGCACGTTTCGCTCTCCGGTACCCTTCTTGTCGAGACCGTA 149608 Query 7612 CGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAG 7670 |||||||| || || || || || || ||||| ||||| ||| |||| || | || | Sbjct 149609 GGCGATAGCAGCAGCAGTGGGCTCGTTGATAATTCGAAGTACA-TTCATTCCTGAGATTG 149667 Query 7671 TTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGA 7730 | | |||||||| || || || || || || ||||| ||||| || || || || | || Sbjct 149668 CTCCTGCATCTTTGGTGGCCTGACGCTGTGAGTCGTTGAAGTATGCAGGTACTGTGATGA 149727 Query 7731 CCGCGTCC 7738 | |||||| Sbjct 149728 CAGCGTCC 149735 >seq1340 Length=4405878 Score = 163 bits (180), Expect = 4e-35 Identities = 265/379 (70%), Gaps = 3/379 (1%) Strand=Plus/Minus Query 7447 GAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTC 7506 || |||| |||||||||||| || |||||||| || || || ||| || ||||| Sbjct 3104262 GACTCTCTGATCGAAATCTTCTCCTCCCAAGTGAGTGTCTCCGTTGGTAGCCAACACTTC 3104203 Query 7507 AAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA 7566 || | || |||||| | | || || ||||| || |||||||| || || || || Sbjct 3104202 GAACACTCCGTTGTCAATGGTGAGCATAGAGACATCGAAAGTACCACCTCCAAGATCGAA 3104143 Query 7567 AATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGC 7626 || || | ||| || || | | ||||| || |||||||| ||||| || || || Sbjct 3104142 AACAAGGATGTTGCGCTC-TC--CCTCCTTCTTGTCAAGACCGTAGGCGATGGCGGCTGC 3104086 Query 7627 CGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 || || || || || || || | | |||| |||||||| ||| | ||||| || || Sbjct 3104085 TGTAGGCTCGTTGATGATTCGGACAACATTCAATCCAGCAATGGTTCCGGCATCCTTGGT 3104026 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 ||||| || || | |||||| |||||||| || || || || || |||| | |||| Sbjct 3104025 GGCTTGACGCTGGGCATCGTTGAAGTAGGCAGGCACTGTGACAACAGCGTGTTTCACTTC 3103966 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 ||| || || || || || ||||| || ||||| || |||||||| | || ||||| Sbjct 3103965 CTTTCCAAGGTAAGACTCGGCGATCTCCTTCATCTTTCCGAGAACCATGGCGGAGATCTC 3103906 Query 7807 TTCAGCCGCAAACTGTTTC 7825 ||| | | |||||| ||| Sbjct 3103905 TTCGGGAGTAAACTGCTTC 3103887 >seq1451 Length=625899 Score = 150 bits (166), Expect = 2e-31 Identities = 177/237 (75%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA-GACA 7653 ||||| ||||| || || |||||||| || || ||||| || || || || || | ||| Sbjct 404046 TTCTTGTCGAGGCCATAAGCGATAGCGGCTGCAGTTGGCTCGTTGATGATCCGGACGAC- 403988 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||||| ||||| || || | ||||| || |||||||| ||||| | ||||| ||||| Sbjct 403987 GTTCAATCCAGCGATCGTACCAGCATCCTTGGTCGCTTGACGTTGTGCGTCGTTGAAGTA 403928 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 |||||| || || ||||| |||| | | || | || || || || || || ||||| || Sbjct 403927 GGCCGGAACGGTGACGACTGCGTGCTTCACCTCTTTGCCAAGGTAAGACTCGGCGATCTC 403868 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTC 7830 ||||| || || |||||||| | || || || |||| |||||||| ||||| || Sbjct 403867 CTTCATCTTTGTCAGAACCATGGCGGAGATTTCCTCAGGAGCAAACTGCTTCGTCTC 403811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635119017618240