Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq204 136 9e-27 seq117 127 5e-24 >seq204 Length=107262 Score = 136 bits (150), Expect = 9e-27 Identities = 117/145 (81%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||||||| ||||| | || || || ||||||||||| |||||||||||||| ||||| Sbjct 85969 CTTACCTGCAAAGATCAAGCGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTT 86028 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| ||||||||||||||||| || ||||| ||||||| ||| ||||| || Sbjct 86029 AGCCTTGACATTCTCAATGGTGTCCGATGCCTCGACTTCGAGGGTAATCGTTTTTCCAGT 86088 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | ||||| ||||| | ||||||| Sbjct 86089 AAGCGTTTTAACGAAAATTTGCATT 86113 Score = 120 bits (132), Expect = 7e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || ||||| ||||| || || |||||||| || | || || | ||||| || Sbjct 82273 AACCAGATGGAGAGTTGACTCCTTCTGGATATTGTAGTCCGACAGCGTGCGGCCATCCTC 82332 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| | | || || || ||||| || || || |||||||| Sbjct 82333 GAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCAGGAGGGATTCCCTCCTTGTCTTG 82392 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||||||||| ||||| || || ||||| | || | |||||| Sbjct 82393 AATCTTGGCCTTCACGTTCTCAATTGTGTCTGACGCCTCGACTTCTAACGTGATCGTCTT 82452 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || ||||| || | |||||| Sbjct 82453 CCCAGTAAGGGTCTTTACAAAGATCTGCATT 82483 Score = 114 bits (126), Expect = 3e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 ||||||||||||| ||||| || ||||||||||| || ||||||||||| || || ||| Sbjct 82646 TACCTGCGAAGATTAGTCGCTGCTGGTCTGGAGGGATTCCTTCTTTGTCCTGGATCTTTG 82705 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 ||| || || ||||||||||| ||| ||||| ||||| || | |||||| || || | Sbjct 82706 CCTTTACATTTTCAATGGTGTCAGAAGCCTCCACCTCAAGCGTGATCGTCTTCCCGGTGA 82765 Query 195119 AAGTTTTTACGAACACTTGCATT 195141 || || || || | |||||| Sbjct 82766 GGGTCTTCACAAAGATCTGCATT 82788 Score = 114 bits (126), Expect = 3e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 ||||||||||||| |||||||| || || || ||||| || ||||| ||||||||||| Sbjct 83248 TACCTGCGAAGATTAGTCGTTGCTGATCAGGTGGAATACCCTCTTTATCTTGAATTTTGG 83307 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 |||||| |||||||||||||| || || || || || || | ||||||||| || | Sbjct 83308 CCTTGACATTCTCAATGGTGTCGGAGGCCTCGACCTCGAGTGTGATCGTCTTTCCAGTGA 83367 Query 195119 AAGTTTTTACGAACACTTGCATT 195141 || || || || | ||||||| Sbjct 83368 GGGTCTTGACAAAAATTTGCATT 83390 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 |||||||||||||| ||||| || ||||||||||| || ||||| ||||| || || ||| Sbjct 83917 TTACCTGCGAAGATTAGTCGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTTT 83976 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || ||||||||||| ||| |||||||| || || | || || || || Sbjct 83977 GCCTTTACATTTTCAATGGTGTCAGAAGCCTCCACTTCGAGCGTGATGGTTTTGCCGGTG 84036 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 84037 AGCGTCTTGACAAAGATTTGCAT 84059 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 |||||||||| || |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct 85637 TACCTGCGAAAATGAGTCGTTGCTGGTCAGGAGGGATACCCTCTTTGTCCTGAATCTTGG 85696 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 |||||| |||||||||||||| || || || || || || | ||||||||| || | Sbjct 85697 CCTTGACATTCTCAATGGTGTCGGAGGCCTCGACCTCGAGTGTGATCGTCTTTCCAGTGA 85756 Query 195119 AAGTTTTTACGAACACTTGCATT 195141 || || || || | |||||| Sbjct 85757 GGGTCTTGACAAAGATCTGCATT 85779 Score = 100 bits (110), Expect = 6e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 ||||||| ||||| ||||| || ||||||||||| || || || ||||| ||||| || Sbjct 82940 TACCTGCAAAGATTAGTCGCTGCTGGTCTGGAGGGATCCCCTCCTTGTCCTGAATCTTGG 82999 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 || |||||||| |||||||| || ||| || || ||||| | || |||||||| | Sbjct 83000 CTTTCACGTTCTCGATGGTGTCAGACGCTTCGACCTCCAGGGTGATAGTTTTTCCTGTGA 83059 Query 195119 AAGTTTTTACGAACACTTGCATT 195141 || || || || | ||||||| Sbjct 83060 GGGTCTTCACAAAGATTTGCATT 83082 >seq117 Length=131150 Score = 127 bits (140), Expect = 5e-24 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || ||| || |||||||| || || ||||| || ||||| || |||||||| || ||||| Sbjct 12175 CTCACCGGCAAAGATAAGGCGCTGCTGGTCCGGTGGAATCCCCTCTTTGTCCTGGATTTT 12234 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||||||||||| || ||||||||| |||||||| ||||| | ||||||||||| Sbjct 12235 TGCTTTGACGTTCTCGATAGTGTCCGAAGCCTCCACTTCCAGGGTGATGGTCTTTCCTGT 12294 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 || || || ||||| | ||||||| Sbjct 12295 CAGCGTCTTCACGAAGATTTGCATT 12319 Score = 122 bits (134), Expect = 2e-22 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| ||||||||||| || || || ||||| || || ||||| ||||| || || || Sbjct 11496 CTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGGATCTT 11555 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||||||||||| || ||||||||| |||||||| ||||||| |||||||| || Sbjct 11556 TGCTTTGACGTTCTCGATAGTGTCCGAAGCCTCCACTTCCAGGGTAATGGTCTTTCCAGT 11615 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 || || || ||||| | |||||| Sbjct 11616 CAGGGTCTTGACGAAGATCTGCATT 11640 Score = 122 bits (134), Expect = 2e-22 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || |||||||| ||||| |||||||| || || ||||| ||||| || ||||| Sbjct 13232 CTTACCGGCAAAGATAAGGCGTTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATTTT 13291 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| |||||||||||||||||||| ||| || || ||||| | |||||||| || Sbjct 13292 GGCCTTTACGTTCTCAATGGTGTCCGAGGCTTCGACCTCCAGGGTGATGGTCTTTCCAGT 13351 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 || || || ||||| | |||||| Sbjct 13352 CAGCGTCTTGACGAAGATCTGCATT 13376 Score = 111 bits (122), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || ||| || |||||||||||||| || || || || || || ||||||||||||||||| Sbjct 13987 CTCACCAGCAAAGATAAGTCGTTGCTGATCGGGTGGGATTCCCTCTTTGTCTTGAATTTT 14046 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || ||||| || ||||| |||||| |||||||| | ||| ||||| || Sbjct 14047 CGCCTTTACATTTTCAATTGTATCCGAGGCTTCCACCTCAAGGGTGATCGTTTTTCCAGT 14106 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | ||||| Sbjct 14107 AAGTGTTTTCACGAAGATCTGCAT 14130 Score = 109 bits (120), Expect = 1e-18 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| || | || || || |||||||| ||||| ||||| || || || Sbjct 10763 CTTACCGGCGAAGATGAGCCTCTGCTGATCAGGAGGAATACCTTCCTTGTCCTGGATCTT 10822 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| |||||||||||||| || ||| || ||||||||||| | ||||| || || Sbjct 10823 AGCCTTCACGTTCTCAATGGTATCAGAAGCCTCGACTTCAAGGGTGATGGTCTTCCCGGT 10882 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 ||| || || ||||| | |||||| Sbjct 10883 CAAGGTCTTCACGAAAATCTGCATT 10907 Score = 109 bits (120), Expect = 1e-18 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| || | || || ||||| || |||||||| ||||||||||| || Sbjct 11126 CTTACCGGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCCTTGTCTTGAATCTT 11185 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| ||||||||||| ||||||||| ||| || || | ||| | || ||||| || Sbjct 11186 TGCCTTTACGTTCTCAATAGTGTCCGAAGCTTCGACCTCCAAGGTGATGGTTTTTCCCGT 11245 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 || || || ||||| | |||||| Sbjct 11246 CAGCGTCTTCACGAAGATCTGCATT 11270 Score = 107 bits (118), Expect = 4e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 195000 ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTG 195059 ||| || ||||||||||| || || ||||| ||||| || ||||||||||| || ||| Sbjct 12905 ACCGGCAAAGATAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTGTCTTGGATCTTTGC 12964 Query 195060 CTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119 || || || || || ||||| ||| |||||||| || || | |||||||| ||||| Sbjct 12965 TTTCACATTTTCGATTGTGTCTGAAGCCTCCACTTCGAGCGTGATAGTCTTTCCGGTCAA 13024 Query 195120 AGTTTTTACGAACACTTGCATT 195141 || || ||||| | ||||||| Sbjct 13025 TGTCTTCACGAAAATTTGCATT 13046 Score = 104 bits (114), Expect = 5e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| || || || || ||||| || || ||||| || || || || || Sbjct 11836 CTTACCAGCGAAGATGAGACGCTGCTGATCTGGTGGGATCCCTTCCTTATCCTGGATCTT 11895 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||||||||||| ||||| |||||| || ||||| ||||| | |||||||| || Sbjct 11896 TGCTTTGACGTTCTCGATGGTATCCGAAGCCTCAACTTCCAGGGTGATGGTCTTTCCAGT 11955 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 || || || ||||| | |||||| Sbjct 11956 CAGGGTCTTAACGAAGATCTGCATT 11980 Score = 84.2 bits (92), Expect = 5e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 ||| ||| |||||||| || ||||| || || || || ||||| || || ||||| || | Sbjct 12498 GCTCACCAGCGAAGATGAGACGTTGCTGATCGGGTGGGATGCCCTCCTTATCTTGGATCT 12557 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 | || |||||||| || || || ||| || || || || || | |||||||||| Sbjct 12558 TGGCTTTCACGTTCTCGATTGTATCTGAAGCCTCAACCTCCAGAGTGATGGTCTTTCCTG 12617 Query 195116 TCAAAGTTTTTACGAACACTTGCATT 195141 ||| || || ||||| | |||||| Sbjct 12618 TCAGCGTCTTCACGAAGATCTGCATT 12643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109456922355512