Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq204 95.1 2e-14 >seq204 Length=107262 Score = 95.1 bits (104), Expect = 2e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| || ||||||| | ||||||||||| ||||| | |||||||| | || Sbjct 86113 AATGCAAATTTTCGTTAAAACGCTTACTGGAAAAACGATTACCCTCGAAGTCGAGGCATC 86054 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || || || |||||| ||||| |||||||| || |||||||| || Sbjct 86053 GGACACCATTGAGAATGTCAAGGCTAAAATCCAAGACAAAGAAGGAATTCCTCCAGATCA 85994 Query 155942 ACAAAGATTGATTTATGCCGGTAAG 155966 || | ||||| | ||| |||||| Sbjct 85993 GCAGCGCTTGATCTTTGCAGGTAAG 85969 Score = 91.5 bits (100), Expect = 2e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | || || | ||||| || || || || ||||||||||| | || Sbjct 82483 AATGCAGATCTTTGTAAAGACCCTTACTGGGAAGACGATCACGTTAGAAGTCGAGGCGTC 82424 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| |||||||| || || ||||| || || || || ||||| || || Sbjct 82423 AGACACAATTGAGAACGTGAAGGCCAAGATTCAAGACAAGGAGGGAATCCCTCCTGATCA 82364 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || ||||| | |||||| ||||||||||| ||| | | || | || || || || Sbjct 82363 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTGTCGGACTACAA 82304 Query 156002 TAT 156004 ||| Sbjct 82303 TAT 82301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731856118377600