Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq204 98.7 2e-15 seq117 93.3 8e-14 >seq204 Length=107262 Score = 98.7 bits (108), Expect = 2e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || |||| ||| ||||||||||| |||||||| || ||||| |||||| Sbjct 83549 TACCAGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCCTTGTCTTGGATTTTAG 83608 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 || ||||| |||| || |||| || ||||| || || |||||||| || || | Sbjct 83609 CCTTGACATTTTCGATAGTGTCAGACGCCTCCACTTCGAGCGTGATGGTTTTGCCGGTGA 83668 Query 192515 ATGTTTTAATAAATATCTGCAT 192536 || || | ||| || ||||| Sbjct 83669 GCGTCTTGACAAAGATTTGCAT 83690 Score = 93.3 bits (102), Expect = 8e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||| |||||||| || | ||| ||||| || || ||||||||||| ||||| |||||| Sbjct 85970 TTACCTGCAAAGATCAAGCGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTTA 86029 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 || ||||| || | || || | || ||||| || ||||| ||||| ||||| Sbjct 86030 GCCTTGACATTCTCAATGGTGTCCGATGCCTCGACTTCGAGGGTAATCGTTTTTCCAGTA 86089 Query 192514 AATGTTTTAATAAATATCTGCATT 192537 | ||||||| || || |||||| Sbjct 86090 AGCGTTTTAACGAAAATTTGCATT 86113 >seq117 Length=131150 Score = 93.3 bits (102), Expect = 8e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 192396 ACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 192455 |||||||||||| | || || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 13990 ACCAGCAAAGATAAGTCGTTGCTGATCGGGTGGGATTCCCTCTTTGTCTTGAATTTTCGC 14049 Query 192456 TTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 192515 |||||||| || | ||| || | ||| || || || || || ||||| ||||| | Sbjct 14050 CTTTACATTTTCAATTGTATCCGAGGCTTCCACCTCAAGGGTGATCGTTTTTCCAGTAAG 14109 Query 192516 TGTTTTAATAAATATCTGCAT 192536 |||||| | || |||||||| Sbjct 14110 TGTTTTCACGAAGATCTGCAT 14130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984458102703600