Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq204 98.7 2e-15 >seq204 Length=107262 Score = 98.7 bits (108), Expect = 2e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| |||| ||| || |||||||| |||||||| || ||||| |||||| Sbjct 83549 TACCAGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCCTTGTCTTGGATTTTAG 83608 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 || ||||| ||||| || |||| || ||||| || || |||||||| || || | Sbjct 83609 CCTTGACATTTTCGATAGTGTCAGACGCCTCCACTTCGAGCGTGATGGTTTTGCCGGTGA 83668 Query 172048 ATGTTTTAATGAATATCTGCAT 172069 || || | || || ||||| Sbjct 83669 GCGTCTTGACAAAGATTTGCAT 83690 Score = 93.3 bits (102), Expect = 8e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 ||||| ||||| || || | ||| || || || || ||||||||||| ||||| |||||| Sbjct 85970 TTACCTGCAAAGATCAAGCGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTTA 86029 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 || ||||| || || || || | || ||||| || ||||| ||||| ||||| Sbjct 86030 GCCTTGACATTCTCAATGGTGTCCGATGCCTCGACTTCGAGGGTAATCGTTTTTCCAGTA 86089 Query 172047 AATGTTTTAATGAATATCTGCATT 172070 | ||||||| ||| || |||||| Sbjct 86090 AGCGTTTTAACGAAAATTTGCATT 86113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905116358548800