Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq117 91.5 1e-13 seq204 84.2 2e-11 >seq117 Length=131150 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/151 (75%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG- 29705 |||||| | || | || ||||||||| || || || |||||||||||||| |||||| | Sbjct 13991 CCAGCAAAGATAAGTCGTTGCTGATCGGGTGGGATTCCCTCTTTGTCTTG-AATTTTCGC 14049 Query 29706 TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765 || ||| |||| | || || || ||| || ||||| || || ||||| ||||| | Sbjct 14050 CTTTACATTTTCAATTGTATCCGAGGCTTCCACCTCAAGGGTGATCGTTTTTCCAGTAAG 14109 Query 29766 GGTTTTAACAAATATCTGCAT-TTTAAAACG 29795 ||||| || || |||||||| | |||||| Sbjct 14110 TGTTTTCACGAAGATCTGCATGCTGAAAACG 14140 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706 || ||| | || | || |||||||| || ||||| |||||||||||||| | ||| | Sbjct 12906 CCGGCAAAGATAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTGTCTTGGATCTTTGCT 12965 Query 29707 TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAG 29766 || ||| |||| | ||||| ||| || ||||| || || ||||| || || || || Sbjct 12966 TTCACATTTTCGATTGTGTCTGAAGCCTCCACTTCGAGCGTGATAGTCTTTCCGGTCAAT 13025 Query 29767 GTTTTAACAAATATCTGCATT 29787 || || || || || |||||| Sbjct 13026 GTCTTCACGAAAATTTGCATT 13046 >seq204 Length=107262 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| | ||||| | |||||||| || ||||| || ||||||||||| | ||| Sbjct 85970 TTACCTGCAAAGATCAAGCGCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGGATTTTA 86029 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 |||||| | || | ||||| || || ||||| || || || ||||| ||||| Sbjct 86030 GCCTTGACATTCTCAATGGTGTCCGATGCCTCGACTTCGAGGGTAATCGTTTTTCCAGTA 86089 Query 29764 AAGGTTTTAACAAATATCTGCATT 29787 | |||||||| || || |||||| Sbjct 86090 AGCGTTTTAACGAAAATTTGCATT 86113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385211049724776