Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1386 172 4e-37 >seq1386 Length=1167445 Score = 172 bits (190), Expect = 4e-37 Identities = 599/924 (65%), Gaps = 8/924 (1%) Strand=Plus/Plus Query 281555 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 281614 || ||||||||||| | |||||| || ||| || || || || || || || ||| Sbjct 148815 CGCTCACCCTCGAACACTTGGATGAGCACACCAGGCTGGTTGTCGGAGTAGGTGGTGAAT 148874 Query 281615 ACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 281673 |||| | | || || || || ||||| || | || | | ||||| | ||| Sbjct 148875 G-TCTGACTGGTCTTGGTGGGGATGGTGGTGTTCCTCTTGATCAGAGCAGTCATCACACC 148933 Query 281674 ACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAG 281733 |||||||| || | |||||| || ||||| | ||||||| || | || || ||| | Sbjct 148934 TCCAGCTGTCTCAATACCAAGTGAGAGAGGTGCCACATCAAGAAGCAGAAGATCTTGCAC 148993 Query 281734 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 281793 | ||| | | ||| ||| ||||| ||||| | ||| |||||||| ||||| || Sbjct 148994 TGCCTCAGACTTGTCACCGGAAAGGATAGCAGCTTGGACAGCGGCACCATAGGCAACGGC 149053 Query 281794 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTG 281853 |||||||| || | | | || |||| || ||| ||| | || ||||| || | Sbjct 149054 CTCATCAGGGTTGATCGACTTGTTCAGTTCCTTTCCAGAGAAGAGATCAGAAAGCAGCT- 149112 Query 281854 TCTTACCTTA-GGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATT 281912 ||| | ||| || ||||| | || ||||| || | || || ||||| | ||| | Sbjct 149113 TCTGAACTTTCGGGATACGGGTGGAACCTCCGACCAGGACGATGTCATGGATCTGGCTCT 149172 Query 281913 TATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGT 281972 | |||| || | ||| | ||| || ||||| || | | | |||| | Sbjct 149173 TGTCCATCTTAGCATCTCTCAGGGATTTCTCGACGGGGTCCATCGTGGAACGGAACAGAT 149232 Query 281973 CTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCG 282031 | | |||||||| || || |||| ||| | || | || || || || || ||| Sbjct 149233 CGGCGCAAAGTTCCTCAAAGCGGGCTCGAGTGAT-GTTAGTGTAGAAGTCGATACCCTCG 149291 Query 282032 AACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGT 282091 || | || || | ||| || | || |||| || ||||| || | ||| || |||||| Sbjct 149292 AAGAGTGAGTCGATTTCGATAGAAGCCTGAGATGAGGAAGAGAGGGTACGCTTGGCACGT 149351 Query 282092 TCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGATTCAAATCTGTTTTATA 282150 || || ||||| | || | || | || | | | || || | |||| | || | Sbjct 149352 TCGCAAGCTGTGCGGAGACGACGCAGAGCACGAGGGTTAGTG-TTGAGATCTTTCTTGTG 149410 Query 282151 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 282210 || | |||||| ||| | || | | || | || || || || ||||| ||||| Sbjct 149411 CTTGCGCTTGAACTCTGCGACGAAGTGGTTGACCATTCGGTTGTCGAAGTCTTCTCCTCC 149470 Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270 | | ||||| || | || | | |||||| ||| | |||||| || | | || | Sbjct 149471 AAGGTGAGTATCACCAGCAGTGGATTTTACTTCGAAGATTCCATCCTCGATGGTCAGGAT 149530 Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 | |||||| ||| ||||| || | ||| || || || || || ||| | Sbjct 149531 GGACACATCAAAGGTACCACCTCCAAGATCGAAGATGAGCACGTTTCGCTCTCCGGTACC 149590 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 || || || ||||| || || | |||||||||||| || || || ||||||| | || Sbjct 149591 CTTCTTGTCGAGACCGTAGGCGATAGCAGCAGCAGTGGGCTCGTTGATAATTCGAAGTAC 149650 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 ||| | || | ||| |||||||||||| ||||| || | ||||| ||||| || || Sbjct 149651 ATTCATTCCTGAGATTGCTCCTGCATCTTTGGTGGCCTGACGCTGTGAGTCGTTGAAGTA 149710 Query 282451 TGCAGGAACAGTAATAACGGCATC 282474 |||||| || || || || || || Sbjct 149711 TGCAGGTACTGTGATGACAGCGTC 149734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740545169736336