Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1338 89.7 4e-13 seq204 89.7 4e-13 >seq1338 Length=4677894 Score = 89.7 bits (98), Expect = 4e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 27106 TACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGT 27165 |||| ||| | ||||||||||| ||||| || || | ||||| || || ||||||| Sbjct 229762 TACCAGCGAAGATGAGACGCTGCTGATCAGGTGGGATTCCCTCCTTGTCTTGGATCTTGG 229703 Query 27166 TTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCA 27225 |||| | || | ||||| | ||||||||| || || || || | || ||||| | Sbjct 229702 CCTTCACATTCTCGATCGTGTCCGAGGCTTCAACCTCGAGCGTGATTGTCTTCCCCGTGA 229643 Query 27226 GAGTTTTCACAAAGATTTGCAT 27247 |||| ||||| ||||||||||| Sbjct 229642 GAGTCTTCACGAAGATTTGCAT 229621 >seq204 Length=107262 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 27013 AATTA-TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071 ||||| |||||||| || | || | |||| ||| | || || || || || |||||| Sbjct 82247 AATTAATTGCCTCCACGGAGACGAAGAACCAGATGGAGAGTTGACTCCTTCTGGATATTG 82306 Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131 ||||| || |||| | || |||||||| || ||||| | || | | ||| ||| Sbjct 82307 TAGTCCGACAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGA 82366 Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191 || || || | ||||| || || |||||| |||| | | || | ||||||| Sbjct 82367 TCAGGAGGGATTCCCTCCTTGTCTTGAATCTTGGCCTTCACGTTCTCAATTGTGTCTGAC 82426 Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||||| || || | || || || || || || |||||||| ||||| Sbjct 82427 GCCTCGACTTCTAACGTGATCGTCTTCCCAGTAAGGGTCTTTACAAAGATCTGCAT 82482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424925409450432