Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq204 102 6e-17 seq117 84.2 1e-11 >seq204 Length=107262 Score = 102 bits (112), Expect = 6e-17 Identities = 111/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||||||||| || || ||||||||||| || |||||||| || | | Sbjct 86113 AATGCAAATTTTCGTTAAAACGCTTACTGGAAAAACGATTACCCTCGAAGTCGAGGCATC 86054 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 |||||| |||| ||| | || | |||| | ||||||||||| | || ||||||| Sbjct 86053 GGACACCATTGAGAATGTCAAGGCTAAAA-TCCAAGACAAAGAAGGAATTCCTCCAGATC 85995 Query 23729 AACAGCGTTTAATATTTGCCGGCAA 23753 | ||||| || || ||||| || || Sbjct 85994 AGCAGCGCTTGATCTTTGCAGGTAA 85970 >seq117 Length=131150 Score = 84.2 bits (92), Expect = 1e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || || || ||||||||||| ||||| | || || || | | Sbjct 11270 AATGCAGATCTTCGTGAAGACGCTGACGGGAAAAACCATCACCTTGGAGGTCGAAGCTTC 11211 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||||| |||| | |||| ||| ||| ||||| ||||| | || |||||||| Sbjct 11210 GGACACTATTGAGAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCACCAGATCA 11151 Query 23730 ACAGCGTTTAATATTTGCCGGCAA 23753 ||| | | || |||||||| || Sbjct 11150 GCAGAGGCTCATCTTTGCCGGTAA 11127 Score = 82.4 bits (90), Expect = 5e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| || || |||||||||||||| || || || || || || Sbjct 14130 ATGCAGATCTTCGTGAAAACACTTACTGGAAAAACGATCACCCTTGAGGTGGAAGCCTCG 14071 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| |||| |||||| |||||||| || | || || ||||| Sbjct 14070 GATACAATTGAAAATGTAAAGGCGAAAATTCAAGACAAAGAGGGAATCCCACCCGATCAG 14011 Query 23731 CAGCGTTTAATATTTGCCGG 23750 || || | || ||||| || Sbjct 14010 CAACGACTTATCTTTGCTGG 13991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002448561888