Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq11380 91.5 2e-13 >seq11380 Length=6731 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || ||||| || || ||||| || || | ||| | ||||| Sbjct 5910 ATGCAGATCTTCGTGAAAACACTTACTGGAAAAACGATCACCCTTGAGGTGGAAGCCTCG 5851 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| |||| |||||||||||| ||||| || || ||||| ||||| Sbjct 5850 GATACAATTGAAAATGTAAAGGCGAAAATTCAAGACAAAGAGGGAATCCCACCCGATCAG 5791 Query 124659 CAAAGGCTTATTTTTGCAGGAAA 124681 ||| | ||||||||||| || || Sbjct 5790 CAACGACTTATTTTTGCTGGTAA 5768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754795155420800