Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2109 98.7 1e-15 >seq2109 Length=25121 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 78996 ATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATT 79055 ||| || || ||||||| ||| || || |||| | | | | || | ||| ||||| Sbjct 21266 ATTTTTCATGTCTTCATCCCACAAATTCAGCTCGACAAGATCCTTCAGCAAATGTGGATT 21207 Query 79056 AACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTC 79115 || | ||| || || || || | || || ||| |||| || || ||| ||||| || Sbjct 21206 CACAATTTGGAAATCACCGGAGAGCACCCTTCGACTGTATATGTTTGAGGTGTATGGCTC 21147 Query 79116 CACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAA 79175 | |||||| ||||| || | |||||||||||| || ||||||||||| ||||||| | Sbjct 21146 GATCGATTCGTTATTGCCAAGAATTTGAGCAGTGGACGCCGTTGGCATGGGTGCCAGGAG 21087 Query 79176 TAAACTATT 79184 | |||||| Sbjct 21086 GAGACTATT 21078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717640485388840