Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq2989 93.3 3e-14 >seq2989 Length=17586 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||||||||| || | | |||||| |||| ||| || || || | |||||| ||||| Sbjct 15728 GCCTCCACGAAGGCGAAGCACCAAGTGGAGTGTGGATTCTTTCTGGATATTGTAGTCGGA 15787 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | ||||| |||| || | |||||||||||| || || | | ||| ||||| || || Sbjct 15788 AAGAGTACGACCGTCCTCGAGTTGTTTGCCGGCGAATATAAGCCTCTGCTGATCTGCAGG 15847 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | ||||||||| || |||| | || || | ||| ||||| ||| |||| Sbjct 15848 AATACCTTCTTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCCGAAGCTCCGAC 15907 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || || || || || || || || ||||| || || |||||| Sbjct 15908 TTCAAGGGTGATGGTCTTCCCTGTCAGCGTCTTCACGAAGATCTGCATT 15956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381044332370898