Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq2989 84.2 2e-11 >seq2989 Length=17586 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || || ||||| ||||| || || ||||| ||| ||| | | |||| || Sbjct 15747 ACCAAGTGGAGTGTGGATTCTTTCTGGATATTGTAGTCGGAAAGAGTACGACCGTCCTCG 15806 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||||||| ||| |||| | | || || || ||||| ||||||||||| Sbjct 15807 AGTTGTTTGCCGGCGAATATAAGCCTCTGCTGATCTGCAGGAATACCTTCTTTGTCCTGG 15866 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| |||||| | || ||||| || | | | || || | ||| ||||| || Sbjct 15867 ATCTTGGCCTTTACGTTCTCAATGGTGTCCGAAGCTCCGACTTCAAGGGTGATGGTCTTC 15926 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||||||| || || || || || ||||| Sbjct 15927 CCTGTCAGCGTCTTCACGAAGATCTGCAT 15955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361870299737121