Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq20539 95.1 1e-14 >seq20539 Length=3094 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || ||||||| | || || ||||| | |||||||| |||||||| |||| ||||| || Sbjct 2602 CACAATGCAAATTTTCGTTAAAACGCTTACTGGAAAGACGATTACCCTCGAGGTCGAAGC 2543 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 |||||||||||| | ||||| || || ||||||||||| || ||||| || Sbjct 2542 GTCTGACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGAATTCCTCCTGA 2483 Query 24107 TCAACAGAGACTGATTT 24123 ||| ||| | ||||||| Sbjct 2482 TCAGCAGCGCCTGATTT 2466 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || | ||||| || |||| || | || |||||||| Sbjct 386 AATGCAGATCTTTGTGAAGACCCTTACTGGGAAGACGATCACGTTAGAGGTCGAGGCGTC 327 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| |||||| | || || ||||| ||||| ||||| || ||||||||||| Sbjct 326 AGACACAATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCA 267 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 |||||| |||| | | ||| ||||| ||||| |||| Sbjct 266 GCAGAGATTGATCTTTGCCGGAAAGCAGCTCGAGGATG 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429569310407055