Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2989 95.1 1e-14 seq20539 91.5 1e-13 >seq2989 Length=17586 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || || ||||| ||| | ||||||| || || |||||||| || Sbjct 15759 GTGGATTCTTTCTGGATATTGTAGTCGGAAAGAGTACGACCGTCCTCGAGTTGTTTGCCG 15818 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || || | ||| || || | |||||| ||||||||||| ||||| ||| Sbjct 15819 GCGAATATAAGCCTCTGCTGATCTGCAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTT 15878 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | | |||| || | ||| | || || || ||||| || Sbjct 15879 ACGTTCTCAATGGTGTCCGAAGCTCCGACTTCAAGGGTGATGGTCTTCCCTGTCAGCGTC 15938 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 15939 TTCACGAAGATCTGCAT 15955 >seq20539 Length=3094 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 114240 TTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTT 114299 |||||||| |||| || ||||| || ||||||||||||||||||||||| |||||| Sbjct 850 TTACCAGCAAAGATCAGTCGCTGCTGATCCGGAGGAATGCCTTCTTTGTCTTGAATCTTG 909 Query 114300 TGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTC 114359 || | | ||| | ||||| | | ||||| |||| || | |||||| || || Sbjct 910 GCCTTCACATTTTCGATTGTGTCTGACGCCTCGACCTCCAGAGTGATCGTTTTCCCAGTG 969 Query 114360 AGAGTTTTTACAAAAATCTGCAT 114382 || || || ||||| |||||||| Sbjct 970 AGGGTCTTCACAAAGATCTGCAT 992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419776070127372