Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq51893 86.0 7e-12 seq12562 86.0 7e-12 seq62828 82.4 8e-11 seq44678 82.4 8e-11 seq44196 82.4 8e-11 seq18555 82.4 8e-11 seq7980 82.4 8e-11 seq6847 82.4 8e-11 >seq51893 Length=1680 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| || |||| |||| | ||| |||||| |||||| | ||||||||||| | Sbjct 1484 ATGCAAAACTT-CTCCCCGGCCGGGAATTGAACCCGGGTCTCGCACGTGACAGGCGCGGA 1542 Query 57055 TACTCACCACTATACTACCGAGGA 57078 |||||||||||||||||||||||| Sbjct 1543 TACTCACCACTATACTACCGAGGA 1566 >seq12562 Length=6188 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| || |||| |||| | ||| |||||| |||||| | ||||||||||| | Sbjct 176 ATGCAAAACTT-CTCCCCGGCCGGGAATTGAACCCGGGTCTCGCACGTGACAGGCGCGGA 234 Query 57055 TACTCACCACTATACTACCGAGGA 57078 |||||||||||||||||||||||| Sbjct 235 TACTCACCACTATACTACCGAGGA 258 >seq62828 Length=1153 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| |||||| |||| | ||| |||||| |||||| | ||||||| || | Sbjct 812 ATGCAAAACATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 753 Query 57055 TACTCACCACTATACTACCGAGGAT 57079 ||||||||||||||||||||||||| Sbjct 752 TACTCACCACTATACTACCGAGGAT 728 >seq44678 Length=3340 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| |||||| |||| | ||| |||||| |||||| | ||||||| || | Sbjct 1347 ATGCAAAACATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 1288 Query 57055 TACTCACCACTATACTACCGAGGAT 57079 ||||||||||||||||||||||||| Sbjct 1287 TACTCACCACTATACTACCGAGGAT 1263 >seq44196 Length=3650 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| |||||| |||| | ||| |||||| |||||| | ||||||| || | Sbjct 692 ATGCAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 633 Query 57055 TACTCACCACTATACTACCGAGGAT 57079 ||||||||||||||||||||||||| Sbjct 632 TACTCACCACTATACTACCGAGGAT 608 >seq18555 Length=3993 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| |||||| |||| | ||| |||||| |||||| | ||||||| || | Sbjct 2533 ATGCAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 2474 Query 57055 TACTCACCACTATACTACCGAGGAT 57079 ||||||||||||||||||||||||| Sbjct 2473 TACTCACCACTATACTACCGAGGAT 2449 >seq7980 Length=9080 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| |||||| |||| | ||| |||||| |||||| | ||||||| || | Sbjct 957 ATGCAAAACATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 1016 Query 57055 TACTCACCACTATACTACCGAGGAT 57079 ||||||||||||||||||||||||| Sbjct 1017 TACTCACCACTATACTACCGAGGAT 1041 >seq6847 Length=11183 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| |||||| |||| | ||| |||||| |||||| | ||||||| || | Sbjct 8563 ATGCAAAACATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 8622 Query 57055 TACTCACCACTATACTACCGAGGAT 57079 ||||||||||||||||||||||||| Sbjct 8623 TACTCACCACTATACTACCGAGGAT 8647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542737617813040