Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16]
69,981 sequences; 332,875,813 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq20539 82.4 8e-11
seq7012 82.4 8e-11
>seq20539
Length=3094
Score = 82.4 bits (90), Expect = 8e-11
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 138472 TTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTT 138531
||||| | | |||| || ||||| || |||||||| || ||||||||||| ||| | ||
Sbjct 850 TTACCAGCAAAGATCAGTCGCTGCTGATCCGGAGGAATGCCTTCTTTGTC-TTGAATCTT 908
Query 138532 TG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590
| || | | ||| | ||||| | || ||| ||||| | || | |||||| |||||
Sbjct 909 GGCCTTCACATTTTCGATTGTGTCTGACGCCTCGACCTCCAGAGTGATCGTTTTCCCAGT 968
Query 138591 CAGAGTTTTTACAAAAATCTGCAT 138614
|| || || ||||| ||||||||
Sbjct 969 GAGGGTCTTCACAAAGATCTGCAT 992
>seq7012
Length=10378
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| |||||||||||||| || |||||| |||||||| || || || |
Sbjct 4481 GACTCCTTCTGAATGTTGTAGTCCGACAGAGTACGGCCATCCTCGAGCTGCTTTCCAGCG 4422
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| || || || || ||||| || ||||| ||| || | |
Sbjct 4421 AAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGGATCTTAGCCTGCACA 4362
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||| | | ||| ||||||| ||| | || || || || ||||| ||
Sbjct 4361 TTCTCGATCGTGTCCGAGGCCTCAACCTCGAGCGTGATTGTCTTCCCCGTGAGAGTCTTC 4302
Query 138601 ACAAAAATCTGCATGGCT 138618
|| || | |||||| ||
Sbjct 4301 ACGAAGACTTGCATGACT 4284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495828288262320
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |