Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq11380 87.8 2e-12 seq7012 84.2 2e-11 >seq11380 Length=6731 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| ||||| || || || || ||||||||| | || |||||||| | Sbjct 3742 AATGCAAATCTTCGTGAAAACCCTGACAGGAAAGACCATCACCCTGGAAGTCGAGGCTTC 3683 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | || | ||||||| |||||||||||||| || | || | Sbjct 3682 GGATACCATCGAGAACG-TCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCACCAGATC 3624 Query 38362 AACAGCGGCTCATTT 38376 | ||||| ||||||| Sbjct 3623 AGCAGCGTCTCATTT 3609 >seq7012 Length=10378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || |||||||| || || ||||| |||| || |||||| | Sbjct 4288 ATGCAAGTCTTCGTGAAGACTCTCACGGGGAAGACAATCACGCTCGAGGTTGAGGCCTCG 4347 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | | || |||| ||||| ||||| || || | || || Sbjct 4348 GACACGATCGAGAATGTGCAGGCTAAGATCCAAGACAAGGAGGGTATCCCACCTGATCAG 4407 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || ||||| || || | || || || ||||||||| Sbjct 4408 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACTCTGTCGGACTACAAC 4467 Query 38424 ATCCAAAAGGA 38434 || || ||||| Sbjct 4468 ATTCAGAAGGA 4478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499735267591040