Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2109 95.1 1e-14 >seq2109 Length=25121 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 47312 ATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGT 47371 ||| ||||| |||||||| || || || || || || || || || ||||| || || Sbjct 21215 ATGTGGATTCACAATTTGGAAATCACCGGAGAGCACCCTTCGACTGTATATGTTTGAGGT 21156 Query 47372 ATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGA 47431 ||||| || || ||||| ||||| |||| |||||||||||| || || || ||||||| Sbjct 21155 GTATGGCTCGATCGATTCGTTATTGCCAAGAATTTGAGCAGTGGACGCCGTTGGCATGGG 21096 Query 47432 TGCAACTAATAAGCTATTTCTTACTCC 47458 ||| | | | ||||| | |||||| Sbjct 21095 TGCCAGGAGGAGACTATTGCGTACTCC 21069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561617088300840