Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq41513 347 2e-90 seq20539 188 9e-43 seq6967 161 1e-34 seq7012 156 6e-33 seq11380 150 2e-31 seq21247 141 1e-28 seq39560 127 3e-24 seq49065 122 1e-22 >seq41513 Length=9673 Score = 347 bits (384), Expect = 2e-90 Identities = 680/996 (68%), Gaps = 12/996 (1%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || |||||||| ||||||| || ||||| || ||||| || ||||| || | || || Sbjct 2568 ACAGTACCTGCATACTTCAACGACTCACAGCGTCAGGCCACTAAGGATGCAGGAGCAATC 2509 Query 195779 GCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 | || | || ||| ||| |||||||||| || || || || || || || || || || Sbjct 2508 TCAGGAATGAA-TGTACTTCGAATTATCAACGAGCCCACTGCTGCCGCTATCGCCTACGG 2450 Query 195838 TCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTAC 195897 ||| ||||| || || ||| ||| || | ||||| ||||| || |||||||| Sbjct 2449 TCTCGACAAAAAGGGTACCGGAGAGCGAAACGTGCTCATCTTCGATCTTGGAGGTGGTAC 2390 Query 195898 GTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 || ||||| || | || | || || | ||| || |||||||| || | |||||||| Sbjct 2389 CTTCGATGTGTCCATCCTGACCATCGAGGATGGAATCTTCGAAGTGAAATCCACTGCTGG 2330 Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATG 196016 ||| ||||| || || || ||||| ||||| || | || || || ||| | | Sbjct 2329 TGACACTCACCTTGGAGGAGAAGACTTCGACAACCGAATGGTCAACCACTTCGTC-GCAG 2271 Query 196017 AGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTA 196076 ||||| || ||| | ||||| ||| | || ||| | ||||| ||||| || Sbjct 2270 AGTTCAAGCGCAAGCACAAGAAGGATCTCAACACTAACCCTCGTGCTCTGCGTCGTCTCC 2211 Query 196077 GGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGA 196136 | || || || ||||||||||| || || |||||||| | |||| | | || | Sbjct 2210 GCACAGCTTGCGAACGTGCCAAGCGTACCCTCTCTTCCTCATCTCAGGCTTCCATCGAAA 2151 Query 196137 TTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAG 196196 | || || |||||||| || || |||||||| || | || || || || || ||||| | Sbjct 2150 TCGACTCATTGTTTGAGGGTATCGACTTCTACACTAACATCACTCGAGCCCGCTTTGAGG 2091 Query 196197 AGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACG 196256 | | | | |||||||| | ||||| || ||||| || || | |||| Sbjct 2090 AACTCTGCGCGGATTTGTTCCGTTCCACCATGGACCCCGTTGAGAAATCCCTGAGGGACG 2031 Query 196257 CAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTC 196316 | |||||||| ||| | | | || || || || || ||||| || |||||||| | Sbjct 2030 CCAAGATGGACAAGAGCCAAATCCACGACATCGTTCTGGTCGGAGGTTCCACCCGTATCC 1971 Query 196317 CGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCA 196376 ||||| | || || | |||||| ||||| | ||||| | ||||| | |||| Sbjct 1970 CGAAGGTCCAGAAGCTCCTTTCTGATCTCTTCTCTGGAAAAGAACTGAACAAGTCCATCA 1911 Query 196377 ACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTG 196436 |||| ||||| || ||||| |||||||| || || ||||||||||| ||||| || || Sbjct 1910 ACCCTGATGAGGCCGTTGCCTATGGTGCCGCTGTCCAGGCTGCTATCCTCTCCGG---TG 1854 Query 196437 ACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493 |||| | | || |||||||||||||| || ||||| ||||| | || || ||| Sbjct 1853 ACAAGTCTGAGGCAGTGCAAGATCTTCTGCTTCTCGATGTGGCACCTCTCTCACTTGGTA 1794 Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553 |||| ||||| || ||||| |||||| | || | ||||| || || || || || | Sbjct 1793 TTGAGACAGCTGGAGGTGTGATGACTGCTCTGATCAAGAGGAATACCACCATCCCCACGA 1734 Query 196554 AGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTAT 196613 ||| || || | || || || || || || |||||||| | || || |||| Sbjct 1733 AGACCAGTCAGACATTCACCACCTACTCGGACAACCAGCCAGGTGTACTCATCCAGGTAT 1674 Query 196614 ATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACG 196672 || || || || | | || | ||||||||| |||| ||||||| ||||| || | Sbjct 1673 TCGAGGGTGAGCG-TGCTATGACCAAGGATAACAATCTTCTTGGAAAGTTCGAGCTGTCC 1615 Query 196673 GGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATT 196708 || ||||| | ||||| | || || || |||||| Sbjct 1614 GGAATTCCTCCAGCACCTCGTGGAGTGCCGCAGATT 1579 >seq20539 Length=3094 Score = 188 bits (208), Expect = 9e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||||||||| || || ||||| | ||||| ||| ||||| Sbjct 385 ATGCAGATCTTTGTGAAGACCCTTACTGGGAAGACGATCACGTTAGAGGTCGAGGCGTCA 326 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| ||| | || |||||||| ||||| |||||||| || || ||||||||| Sbjct 325 GACACAATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAG 266 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || ||||| || || ||||| || ||||| || || || | || ||||| Sbjct 265 CAGAGATTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGCACGCTATCAGACTACAAT 206 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| ||||| || || ||||| | ||||| || || Sbjct 205 ATCCAGAAGGAGTCCACTCTCCATCTGGTTCTTCGTCTTCGTGGAGG 159 Score = 163 bits (180), Expect = 4e-35 Identities = 122/143 (85%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| ||||| ||||| || ||||| ||| ||||| Sbjct 992 ATGCAGATCTTTGTGAAGACCCTCACTGGGAAAACGATCACTCTGGAGGTCGAGGCGTCA 933 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || | || |||||||||||||| || ||||||||||| || |||||| Sbjct 932 GACACAATCGAAAATGTGAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCGGATCAG 873 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || ||||| || ||||||||||| Sbjct 872 CAGCGACTGATCTTTGCTGGTAA 850 Score = 143 bits (158), Expect = 3e-29 Identities = 117/142 (82%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || ||||| || || |||||||| ||||||||||| |||||||| ||| | || Sbjct 1584 ATGCAGATTTTTGTCAAGACGCTTACTGGCAAAACTATCACACTCGAGGTAGAGGCTTCC 1525 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | ||||||||||| ||||| |||||||| |||||||| || ||| Sbjct 1524 GACACTATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAG 1465 Query 171982 CAACGACTTATTTTTGCTGGTA 172003 || ||||| || ||||| |||| Sbjct 1464 CAGCGACTGATCTTTGCGGGTA 1443 Score = 141 bits (156), Expect = 1e-28 Identities = 117/143 (82%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || ||||| ||||||||||| || || ||||||||||| || |||| Sbjct 2598 ATGCAAATTTTCGTTAAAACGCTTACTGGAAAGACGATTACCCTCGAGGTCGAAGCGTCT 2539 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||| || ||||| || ||||| ||||| || |||||| Sbjct 2538 GACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAG 2479 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || || || |||||||||||||| Sbjct 2478 CAGCGCCTGATTTTTGCTGGTAA 2456 Score = 131 bits (144), Expect = 2e-25 Identities = 114/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || |||||||| |||||||| || ||||| ||||| || || | || Sbjct 1300 ATGCAGATCTTCGTAAAAACCCTCACTGGAAAGACGATCACTCTCGAAGTCGAAGCTTCT 1241 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| || || || |||||||||||||| |||||||| || ||| Sbjct 1240 GACACCATTGAGAATGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCACCTGACCAG 1181 Query 171982 CAACGACTTATTTTTGCTGGTA 172003 |||||||| ||||| || |||| Sbjct 1180 CAACGACTAATTTTCGCAGGTA 1159 Score = 118 bits (130), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || || || || || ||||| ||||| || || || ||| | || Sbjct 1956 ATGCAAATCTTTGTTAAGACGCTCACCGGTAAAACCATCACGCTTGAAGTGGAGGCATCT 1897 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || |||| || ||||| ||||| |||||||| || ||||| || ||| Sbjct 1896 GACACAATCGAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAG 1837 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 ||||| | || || || ||||| Sbjct 1836 CAACGTTTGATCTTCGCAGGTAA 1814 >seq6967 Length=10669 Score = 161 bits (178), Expect = 1e-34 Identities = 258/370 (70%), Gaps = 3/370 (1%) Strand=Plus/Plus Query 195619 GAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGC 195678 ||| || || ||||||||||||| || | ||||| | ||||||||||||| || Sbjct 8018 GAAGCAGTTCACTCCCGAAGAAATCTCTGCCATGGTTCTCGGAAAGATGAAGGAGATCGC 8077 Query 195679 GGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAG 195738 || |||| | | || || |||||| | || || || ||||| ||||| ||||||| Sbjct 8078 CGAGTCTTACCTCGGAAAGGAAGTGAAACACGCTGTCGTCACTGTGCCTGCCTACTTCAA 8137 Query 195739 TGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAG 195798 |||| | ||||| || || || ||||| || | | ||||| || | || | | | Sbjct 8138 TGATGCCCAACGTCAAGCCACCAAGGATGCCGGAACCATTGCTGGATTGAATGTTGTCCG 8197 Query 195799 AATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGA 195858 ||| || || || || ||||| || || || || || ||||| |||||| ||||| | Sbjct 8198 AATCATTAACGAGCCTACAGCAGCCGCCATCGCCTACGGTCTTGACAAG---AAGGAAGG 8254 Query 195859 AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAA 195918 ||| || | | |||| ||||| || |||||||| || |||||||| | |||| Sbjct 8255 AGAGCGCAACATCCTCGTCTTCGATCTTGGAGGTGGTACCTTCGATGTCTCCATGCTCAC 8314 Query 195919 TATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGA 195978 ||||| ||| | |||||||| |||||| || |||||||| | || || || Sbjct 8315 CATTGACAATGGAGTGTTCGAAGTGCTGGCTACCAACGGAGATACTCACTTGGGAGGAGA 8374 Query 195979 AGATTTCGAT 195988 |||||||||| Sbjct 8375 AGATTTCGAT 8384 >seq7012 Length=10378 Score = 156 bits (172), Expect = 6e-33 Identities = 160/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||| |||| ||||| || || || || || || ||||| |||||||||||| | || Sbjct 4288 ATGCAAGTCTTCGTGAAGACTCTCACGGGGAAGACAATCACGCTCGAGGTTGAGGCCTCG 4347 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | | || ||||| ||||| ||||| || || ||||| |||||| Sbjct 4348 GACACGATCGAGAATGTGCAGGCTAAGATCCAAGACAAGGAGGGTATCCCACCTGATCAG 4407 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||||| || ||||| ||||| || | || |||||| Sbjct 4408 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACTCTGTCGGACTACAAC 4467 Query 172042 GTTCAAAAGGAGTCTA-CTCTACACCTT 172068 |||| |||||||| | | || |||||| Sbjct 4468 ATTCAGAAGGAGTCCATCCCTCCACCTT 4495 >seq11380 Length=6731 Score = 150 bits (166), Expect = 2e-31 Identities = 121/146 (83%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| ||||| |||||||| |||||||||||||| |||||||| ||||| || | Sbjct 5913 AGCATGCAGATCTTCGTGAAAACACTTACTGGAAAAACGATCACCCTTGAGGTGGAAGCC 5854 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGAT 171978 || || ||||| || || | || || || |||||||| || || || || ||||||||| Sbjct 5853 TCGGATACAATTGAAAATGTAAAGGCGAAAATTCAAGACAAAGAGGGAATCCCACCCGAT 5794 Query 171979 CAGCAACGACTTATTTTTGCTGGTAA 172004 |||||||||||||||||||||||||| Sbjct 5793 CAGCAACGACTTATTTTTGCTGGTAA 5768 Score = 145 bits (160), Expect = 1e-29 Identities = 118/143 (83%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| |||||||| || |||||||| || |||||||| || || ||| | ||| Sbjct 4471 ATGCAGATCTTCGTGAAAACTCTGACTGGAAAGACCATCACCCTGGAAGTCGAGGCTTCA 4412 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| |||| || ||||| || ||||||||||| || ||||| |||||| Sbjct 4411 GATACTATCGAGAACGTCAAGGCTAAGATCCAGGATAAGGAAGGGATCCCACCAGATCAG 4352 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || || ||||| ||||||||||| Sbjct 4351 CAGCGTCTTATCTTTGCTGGTAA 4329 Score = 136 bits (150), Expect = 5e-27 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| ||||| ||||| |||||||| || ||||| || ||||| ||| | || Sbjct 4836 ATGCAAATCTTCGTGAAGACCCTGACTGGAAAGACCATCACTCTGGAGGTCGAGGCTTCC 4777 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || ||| | ||||||||||| || |||||||| || || ||||| || ||| Sbjct 4776 GATACGATTGAGAACGTAAAAGCCAAGATCCAGGATAAGGAGGGAATCCCACCTGACCAG 4717 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || || ||||| ||||||||||| Sbjct 4716 CAGCGTCTTATCTTTGCTGGTAA 4694 Score = 134 bits (148), Expect = 2e-26 Identities = 115/142 (81%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || ||||| || |||||||| || || ||| | || Sbjct 4105 ATGCAGATCTTCGTGAAGACCCTGACCGGAAAGACCATCACCCTGGAAGTCGAGGCTTCG 4046 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| || ||||| || ||||||||||| || ||||| |||||| Sbjct 4045 GACACTATTGAGAACGTCAAGGCTAAGATCCAGGATAAGGAAGGGATCCCACCAGATCAG 3986 Query 171982 CAACGACTTATTTTTGCTGGTA 172003 || || ||||| |||||||||| Sbjct 3985 CAGCGCCTTATCTTTGCTGGTA 3964 Score = 132 bits (146), Expect = 6e-26 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| |||||||| || |||||||| ||||| || | ||| Sbjct 5545 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACAATCACCCTGGAGGTCGAAGCCTCA 5486 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || ||||| || || || |||||||| || ||||| || ||| Sbjct 5485 GACACCATCGAGAACGTAAAGGCCAAAATCCAGGACAAGGAAGGGATCCCACCAGACCAG 5426 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || || ||||||||||| ||||| Sbjct 5425 CAGCGCCTTATTTTTGCCGGTAA 5403 Score = 129 bits (142), Expect = 8e-25 Identities = 113/141 (80%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||| || | || ||||| || ||||| ||||| || ||| | ||| Sbjct 5209 ATGCAGATTTTCGTGAAGACGTTGACCGGAAAGACGATCACACTCGAAGTGGAGGCTTCA 5150 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || ||||||| ||||| ||||| || || || |||||||| |||||| Sbjct 5149 GACACAATCGAAAATGTCAAAGCAAAGATCCAAGACAAAGAGGGAATTCCACCAGATCAG 5090 Query 171982 CAACGACTTATTTTTGCTGGT 172002 ||||||||||| || || ||| Sbjct 5089 CAACGACTTATCTTCGCCGGT 5069 Score = 123 bits (136), Expect = 3e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || ||||| || |||||||| || || || | || Sbjct 2636 ATGCAGATCTTCGTGAAGACGCTGACAGGAAAGACCATCACCCTAGAAGTCGAAGCTTCG 2577 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || || ||||||||||| ||||||||||| ||||| |||||| Sbjct 2576 GACACCATTGAGAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCACCAGATCAG 2517 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || | || |||||||| ||||| Sbjct 2516 CAGAGGCTCATTTTTGCCGGTAA 2494 Score = 120 bits (132), Expect = 4e-22 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| ||||||||||| || ||||| || |||||||| || || ||| | || Sbjct 3741 ATGCAAATCTTCGTGAAAACCCTGACAGGAAAGACCATCACCCTGGAAGTCGAGGCTTCG 3682 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| |||| || || || || || || || || || ||||| |||||| Sbjct 3681 GATACCATCGAGAACGTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCACCAGATCAG 3622 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || || || |||||||| ||| Sbjct 3621 CAGCGTCTCATTTTTGCCGGT 3601 Score = 114 bits (126), Expect = 2e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || ||||| || || |||||| | || || || | || Sbjct 3000 ATGCAGATCTTCGTCAAGACACTGACTGGGAAGACCATCACCTTGGAAGTCGAAGCTTCG 2941 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || ||||||| ||||| || || |||||||| || ||||| |||||| Sbjct 2940 GATACCATCGAGAATGTCAAAGCAAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAG 2881 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || || ||||| ||||||||||| Sbjct 2880 CAGCGTCTTATATTTGCTGGTAA 2858 >seq21247 Length=2906 Score = 141 bits (156), Expect = 1e-28 Identities = 119/146 (82%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| ||||| |||||||| |||||||||||||| |||||||| ||||| || | Sbjct 2143 AGCATGCAGATCTTCGTGAAAACACTTACTGGAAAAACGATCACCCTTGAGGTGGAAGCC 2202 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGAT 171978 || || || || || || | || || || |||||||| || || || || ||||||||| Sbjct 2203 TCGGATACGATTGAAAATGTAAAGGCGAAAATTCAAGACAAAGAGGGAATCCCACCCGAT 2262 Query 171979 CAGCAACGACTTATTTTTGCTGGTAA 172004 |||||||||||||| ||||||||||| Sbjct 2263 CAGCAACGACTTATCTTTGCTGGTAA 2288 >seq39560 Length=1040 Score = 127 bits (140), Expect = 3e-24 Identities = 172/237 (73%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 195614 GAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAG 195673 |||| |||||| || ||||| || || || || | ||||| ||| |||||||||||| Sbjct 735 GAGACGAAACAGTTCGCTCCTGAGGAGATCTCCGCCATGGTTCTGACCAAGATGAAGGAG 676 Query 195674 ACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTAC 195733 | || || || | | | || ||| ||||| | ||||| || ||||| || || ||| Sbjct 675 ATCGCCGAGTCATACCTTGGCAAAGAGGTGAAGAACGCAGTCGTCACTGTTCCGGCCTAC 616 Query 195734 TTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT 195793 |||| ||| |||| || || ||||| ||||| |||| | | || || || | ||| || Sbjct 615 TTCAACGATGCACAGCGTCAAGCGACCAAGGATGCTGGTACGATCGCTGGATTGAAC-GT 557 Query 195794 C-TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 | | | || ||||| || ||||| || || ||||| || ||||| || |||||||| Sbjct 556 CGTCCGGATAATCAACGAGCCAACTGCAGCCGCAATCGCCTATGGCCTCGACAAGAA 500 >seq49065 Length=1973 Score = 122 bits (134), Expect = 1e-22 Identities = 116/147 (79%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 171858 TAGT-ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 |||| ||||||||||| ||||| || || || || || || ||||| |||||||||||| Sbjct 1846 TAGTCATGCAAATCTTCGTGAAGACTCTCACGGGGAAGACAATCACGCTCGAGGTTGAGG 1787 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| || | || |||||||| || || ||||| || || ||||| | Sbjct 1786 CCTCGGACACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCTG 1727 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTA 172003 ||||||| || || || || ||||||| Sbjct 1726 ATCAGCAGCGTCTCATCTTCGCTGGTA 1700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657286926642320