Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq271 98.7 3e-15 >seq271 Length=49673 Score = 98.7 bits (108), Expect = 3e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633 ||||||| ||||| |||||||||||||| ||||| || || || |||||||| || Sbjct 15201 TTCCATAGCTTTGATCAAACGACGCTGAATGTAACCTGTCTCAGCAGTCTTTACAGCAGT 15260 Query 302634 ATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCC 302693 ||| || ||||| |||| || |||||||| ||||| || | ||| | || ||| || Sbjct 15261 ATCGATAAGACCTTCACGTCCTCCCATAGCGTGGAAAAAGAACTCAGCAGGAGTTAGACC 15320 Query 302694 CCCAATAAAGGAGCTCTCAACGAA 302717 ||| | ||||| |||| ||||| Sbjct 15321 AGCAAGATAGGAGTTCTCTACGAA 15344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470497921885597