Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq11380 95.1 2e-14 seq21247 89.7 8e-13 >seq11380 Length=6731 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | |||||| | || |||||||| || || |||| || ||| | Sbjct 5909 TGCAGATCTTCGTGAAAACACTTACTGGAAAAACGATCACCCTTGAGGTGGAAGCCTCGG 5850 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||||||||| ||||| ||| ||||| || || ||||||||||| | Sbjct 5849 ATACAATTGAAAATGTAAAGGCGAAAATTCAAGACAAAGAGGGAATCCCACCCGATCAGC 5790 Query 146152 AAAGACTCATTTTTGCAGGTAA 146173 || |||| |||||||| ||||| Sbjct 5789 AACGACTTATTTTTGCTGGTAA 5768 >seq21247 Length=2906 Score = 89.7 bits (98), Expect = 8e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | |||||| | || |||||||| || || |||| || ||| | Sbjct 2147 TGCAGATCTTCGTGAAAACACTTACTGGAAAAACGATCACCCTTGAGGTGGAAGCCTCGG 2206 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||||||||| ||||| ||| ||||| || || ||||||||||| | Sbjct 2207 ATACGATTGAAAATGTAAAGGCGAAAATTCAAGACAAAGAGGGAATCCCACCCGATCAGC 2266 Query 146152 AAAGACTCATTTTTGCAGGTAA 146173 || |||| || ||||| ||||| Sbjct 2267 AACGACTTATCTTTGCTGGTAA 2288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785478691114520