Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2989 100 2e-16 seq7012 93.3 4e-14 seq49065 89.7 4e-13 >seq2989 Length=17586 Score = 100 bits (110), Expect = 2e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 |||||| || | || | ||||| || | || || ||||| || |||||||||||| Sbjct 15728 GCCTCCACGAAGGCGAAGCACCAAGTGGAGTGTGGATTCTTTCTGGATATTGTAGTCGGA 15787 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | || |||| ||||| ||||| |||||| | || || | ||| ||||| | || Sbjct 15788 AAGAGTACGACCGTCCTCGAGTTGTTTGCCGGCGAATATAAGCCTCTGCTGATCTGCAGG 15847 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| ||||| || ||||||| || | | | || | ||||| | ||| | || Sbjct 15848 AATACCTTCTTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCCGAAGCTCCGAC 15907 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 ||| || || || | || || ||||| || ||||| ||||| ||||| ||||| Sbjct 15908 TTCAAGGGTGATGGTCTTCCCTGTCAGCGTCTTCACGAAGATCTGCATTCCTGCT 15962 >seq7012 Length=10378 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27054 GAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCG 27113 || || || ||||| |||||||| || | || | || |||||||| || || ||| Sbjct 4481 GACTCCTTCTGAATGTTGTAGTCCGACAGAGTACGGCCATCCTCGAGCTGCTTTCCAGCG 4422 Query 27114 TAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGG 27173 | ||||||||||| ||||| || || | |||||| || || |||||| | || Sbjct 4421 AAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGGATCTTAGCCTGCACA 4362 Query 27174 GTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTC 27233 | || | ||||| | ||| ||||| || || || || | || ||||| ||||| ||| Sbjct 4361 TTCTCGATCGTGTCCGAGGCCTCAACCTCGAGCGTGATTGTCTTCCCCGTGAGAGTCTTC 4302 Query 27234 ACAAAGATTTGCAT 27247 || |||| |||||| Sbjct 4301 ACGAAGACTTGCAT 4288 >seq49065 Length=1973 Score = 89.7 bits (98), Expect = 4e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27106 TACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGT 27165 |||| ||| | ||||||||||| ||||| || || | ||||| || || ||||||| Sbjct 1700 TACCAGCGAAGATGAGACGCTGCTGATCAGGTGGGATTCCCTCCTTGTCCTGGATCTTGG 1759 Query 27166 TTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCA 27225 |||| |||| | ||||| | ||| ||||| || || || || | || ||||| | Sbjct 1760 CCTTCACATTTTCGATCGTGTCCGAGGCCTCAACCTCGAGCGTGATTGTCTTCCCCGTGA 1819 Query 27226 GAGTTTTCACAAAGATTTGCAT 27247 |||| ||||| ||||||||||| Sbjct 1820 GAGTCTTCACGAAGATTTGCAT 1841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424571976238872