Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_028903.1 Length=77266 Score E Sequences producing significant alignments: (Bits) Value seq21931 95.1 6e-15 >seq21931 Length=2350 Score = 95.1 bits (104), Expect = 6e-15 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 2977 AATGTGTCGATGGAGAACTTTGAAAGCTGTCCATTCATGAGGCTACTAATCCTCGGCTGG 3036 ||||| || || | ||| || || | |||||||||||| | | | || | || |||||| Sbjct 1173 AATGTATCAATCGCGAATTTGGACACCTGTCCATTCATTAAGTTGCTTACTCTTGGCTGG 1232 Query 3037 CTAACACCTAGCTTCTCTGCGGCAACACACTGCGACCAACCTTGATCACGAATTAACTTC 3096 ||||| || |||||||| || || ||| ||||| |||| | ||| || | || Sbjct 1233 CTAACTCCGAGCTTCTCAGCTGCGGTTTTCTGTGACCAGCCTTCGTTACGGATCATCTCT 1292 Query 3097 GTAAGAATAATGATCAGCTTGGACTTCAATGAAAGCATGTTGGCCTCTACAGGGT 3151 | || ||||| || ||||||||||| | || ||||||||| ||| |||| || Sbjct 1293 GCAATGATAATAATAAGCTTGGACTTAAGAGACAGCATGTTGAGCTCAACAGAGT 1347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 246915627515207