Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2109 89.7 7e-13 >seq2109 Length=25121 Score = 89.7 bits (98), Expect = 7e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 77060 ATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATT 77119 ||| || || || |||| |||||| ||| ||| | | | | || | ||| ||||| Sbjct 21266 ATTTTTCATGTCTTCATCCCACAAATTCAGCTCGACAAGATCCTTCAGCAAATGTGGATT 21207 Query 77120 AACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTC 77179 || ||||| || || || || | || || ||| |||| || || ||| ||||| || Sbjct 21206 CACAATTTGGAAATCACCGGAGAGCACCCTTCGACTGTATATGTTTGAGGTGTATGGCTC 21147 Query 77180 CACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAA 77239 | ||||| || || || | |||||||||||| || || |||||||| ||||||| | Sbjct 21146 GATCGATTCGTTATTGCCAAGAATTTGAGCAGTGGACGCCGTTGGCATGGGTGCCAGGAG 21087 Query 77240 TAAACTATT 77248 | |||||| Sbjct 21086 GAGACTATT 21078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694061129783840