Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2109 93.3 6e-14 >seq2109 Length=25121 Score = 93.3 bits (102), Expect = 6e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 75655 ATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 75714 ||| || || || |||| |||||| || |||| | | | | || | ||| ||||| Sbjct 21266 ATTTTTCATGTCTTCATCCCACAAATTCAGCTCGACAAGATCCTTCAGCAAATGTGGATT 21207 Query 75715 AACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTC 75774 |||||||| || || || || | || |||||| |||| || || ||| ||||| || Sbjct 21206 CACAATTTGGAAATCACCGGAGAGCACCCTTCGACTGTATATGTTTGAGGTGTATGGCTC 21147 Query 75775 CACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAA 75834 | ||||| || || || | |||||||||||| || || || ||||| ||||||| | Sbjct 21146 GATCGATTCGTTATTGCCAAGAATTTGAGCAGTGGACGCCGTTGGCATGGGTGCCAGGAG 21087 Query 75835 TAAACTATT 75843 | |||||| Sbjct 21086 GAGACTATT 21078 Score = 86.0 bits (94), Expect = 9e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 77354 GTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGT 77413 |||| ||| || | || || ||||| || | ||||||||| || |||||||| |||||| Sbjct 18344 GTTTTCTTATGCAAGTTGGACACGGCGATACGAGCAGCTAGGATAGCATAGTCTGGATGT 18285 Query 77414 TGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACT 77473 || || || | || || ||||||| || ||| | || | || | |||| |||| Sbjct 18284 TGGGTGGTCATCGAAGCAGCAGTTTCTGCTGCCAAATTGTCCAGCTCAACGGTAGAAACT 18225 Query 77474 CCGTTATATAGCCCTTGAATAACTTTCATGGC 77505 || || || || || ||||||||||||||| Sbjct 18224 CCTTTGTACAGTCCACCAATAACTTTCATGGC 18193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712310751721920