Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014- 09-24] 18,635 sequences; 253,242,791 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2276 84.2 1e-11 >seq2276 Length=29858 Score = 84.2 bits (92), Expect = 1e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 34234 GTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTT 34293 ||||| |||| |||| ||||||||||| || | |||||| || || | | |||||| Sbjct 6267 GTCGTACAACCGCTTACCTGCGAAAATCAGTCTCTGCTGATCAGGTGGGATTCCCTCCTT 6208 Query 34294 GTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGAT 34353 || ||||| ||| | || | || | ||||| || ||| || || | ||||| Sbjct 6207 ATCCTGGATCTTCGCCTTCACATTTTCAATAGTATCGGACGCTTCCACCTCGAGTGTGAT 6148 Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || |||||||||||||| ||||| Sbjct 6147 CGTTTTACCAGTAAGCGTTTTCACAAAGATTTGCAT 6112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322998625805600