Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014- 09-24] 18,635 sequences; 253,242,791 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq616 154 2e-32 >seq616 Length=79441 Score = 154 bits (170), Expect = 2e-32 Identities = 298/440 (68%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 |||||| | |||||| || || | || || || | |||| |||||||| || || || Sbjct 56672 AATATCTGCATGCCATGGCTCGAGATAGATTGCAAAGGCTCCTGGTCGTTTATTGCCGCC 56613 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||||| | ||||| ||| || || || || || | |||||||||| | |||||||| Sbjct 56612 TTGATCAACGTATCGAGCAGTATTGTTGTATACGCGTAACATTGGAACCAACCCATTGGA 56553 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 80219 ||| || || || || || | ||| |||| ||||| ||| | | ||| Sbjct 56552 TGTGCCGTTAGTGCCACTAATCAATGAACCAGTGGCCCGAATTTTATGCACGTTCAAACC 56493 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 ||||| || || | || || |||| || ||| | || | ||||| || || ||| | Sbjct 56492 GATTCCTCCAGCGCTCTTCGATATTAGAGCACATTGCTTCAGTGTATCGTAAATACCCGC 56433 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 || ||| ||| |||| | | |||||||| || | ||| | | ||||| Sbjct 56432 AATCGAATCCTCACTCATCGTCAACAGAAAACACGATGAAAGTTGCGGCCATAGCGTTCC 56373 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 |||||||| | || || || || || || || | |||| || |||||||||||| Sbjct 56372 AGCATTAAACATTGTTGGTGATGCATGAGTGAAATACCGTTCACTCATTAGATTGTACGT 56313 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 || ||||||| || |||||| |||||| || ||||| || ||||| | |||||| Sbjct 56312 TTCGATAGCTGCATCGATATCCTCACCATGAATACCGACCGCTACCCGCATAAGCATGTG 56253 Query 80460 CTGAGGTCTTTCAACGATCT 80479 || ||||||||| ||| || Sbjct 56252 TTGTGGTCTTTCAGCGACCT 56233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718101488261400