Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014- 09-24] 18,635 sequences; 253,242,791 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq616 145 2e-29 >seq616 Length=79441 Score = 145 bits (160), Expect = 2e-29 Identities = 305/444 (69%), Gaps = 8/444 (2%) Strand=Plus/Plus Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||| | || || || ||| | ||||| || || | ||||| ||| | |||| | || Sbjct 56240 TGAAAGACCACAACACATGCTTATGCGGGTAGCGGTCGGTATTCATGGTGAGGATATCGA 56299 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATT-CACGCACGCCACGCCAA 363565 ||| || || ||||| || || || | |||| || ||||| ||| || || | |||| Sbjct 56300 TGCAGCTATCGAAACGTACAATCTAATGAGTGAACG-GTATTTCACTCATGCATCACCAA 56358 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 |||||| ||||||||||| | || || | || || || ||||| | | |||| Sbjct 56359 CAATGTTTAATGCTGGAACGCTATGGCCGCAACTTTCATCGTGTTTTCTGTTGACGATGA 56418 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 || ||||| || | |||||| | || ||||| ||| | |||||||| || || |||| Sbjct 56419 GTGAGGATTCGATTGCGGGTATTTACGATACACTGAAGCAATGTGCTCTAATATCGAAGA 56478 Query 363686 ATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG-CACAGAACAGTTACATTCG 363743 || || ||||| ||| | | || | || || |||| | ||| | || ||| | Sbjct 56479 GCGCTGGAGGAATCGGTTTGAACG-TGCATAAAATTCGGGCCACTGGTTCATT-GATTAG 56536 Query 363744 CGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 ||||| | || | | || |||||| ||||||| ||| | || || | ||||||||| Sbjct 56537 TGGCACTAACGGCACA-TCCAATGGGTTGGTTCCAATGTTACGCGTATACAACAATACTG 56595 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | | ||||| || || || || || || ||| || ||||| || |||||||||| Sbjct 56596 CTCGATACGTTGATCAAGGCGGCAATAAACGACCAGGAGCCTTTGCAATCTATCTCGAGC 56655 Query 363863 CTCATCATGCCGATATTTTTGAGT 363886 | ||||| |||||||| |||| Sbjct 56656 CATGGCATGCAGATATTTTCGAGT 56679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303042410072570