Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014- 09-24] 18,635 sequences; 253,242,791 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2276 82.4 7e-11 >seq2276 Length=29858 Score = 82.4 bits (90), Expect = 7e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| ||||||||||| || | || || || |||| ||| | || || ||| | ||| Sbjct 7621 ATGCAGATATTTGTAAAAACGCTTACGGGAAAGACCATAACATTAGAGGTTGAGGCCTCT 7680 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| ||||| |||||| ||| || ||||| ||||| ||||| || || Sbjct 7681 GACACCATTGAGAATGTGAAGACAAAAATTCA-GGATAAAGAGGGGATCCCACCAGATCA 7739 Query 25118 ACAGCGGATTATTTTTGCCGGCAA 25141 ||||| | ||||| || || || Sbjct 7740 GCAGCGTTTGATTTTCGCGGGTAA 7763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433229585117525