Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014- 09-24] 18,635 sequences; 253,242,791 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2276 98.7 1e-15 >seq2276 Length=29858 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 64311 AAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAA 64370 |||| | || ||| || || || || ||||||||||| || || || ||| ||||||| Sbjct 6545 AAATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTATCCTGAATCTTTGCCTTTACAT 6486 Query 64371 CCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 ||| | |||||| ||| |||||||| | ||| | |||||| || |||| |||||| | Sbjct 6485 TCTCAATTGTATCCGAGGCTTCCACTTCGAGAGTAATGGTCTTCCCAGTCAGAGTTTTCA 6426 Query 64431 CGAAAATTTGCATT 64444 | || ||||||||| Sbjct 6425 CAAAGATTTGCATT 6412 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 64311 AAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAA 64370 |||| | || ||| || || || || ||||||||||| || || || ||| ||||||| Sbjct 7150 AAATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTATCCTGAATCTTTGCCTTTACAT 7091 Query 64371 CCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 ||| | |||||| ||| |||||||| | ||| | |||||| || |||| |||||| | Sbjct 7090 TCTCAATTGTATCCGAGGCTTCCACTTCGAGAGTAATGGTCTTCCCAGTCAGAGTTTTCA 7031 Query 64431 CGAAAATTTGCATT 64444 | || ||||||||| Sbjct 7030 CAAAGATTTGCATT 7017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499528413989400