Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014- 09-24] 18,635 sequences; 253,242,791 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq616 95.1 2e-14 >seq616 Length=79441 Score = 95.1 bits (104), Expect = 2e-14 Identities = 292/445 (66%), Gaps = 15/445 (3%) Strand=Plus/Plus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| ||||| ||||| | |||||||| ||| ||||||| ||||| || ||||| ||| Sbjct 56241 GAAAGACCACAACACATGCTTATGCGGGTAGCGGTCGGTATTCATGGTGAGGATATCGAT 56300 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTG----GTATGTTCATCCACGCAACACC 111721 | | | | || || ||| | ||| ||| |||| |||| || ||| |||| Sbjct 56301 GCAGCTATCGAAACGTACAATCTAATGA---GTGAACGGTAT-TTCACTCATGCATCACC 56356 Query 111722 AACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAA 111781 ||| | || || ||||| || | | | || ||| | || ||||| || | | | Sbjct 56357 AACAATGTTTAATGCTGGAACGCTATGGCCGCAACTTTCATCGTGTTTTCTGTTGACGAT 56416 Query 111782 CAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAA 111841 | |||||||| || || ||||||| || || | ||||||| | ||| || || Sbjct 56417 GAGTGAGGATTCGATTGCGGGTATTTACGATACACTGAAGCAATGTGCTCTAATATCGAA 56476 Query 111842 GTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATT 111899 | | ||||| || ||||| || || | ||| | | | |||| | || || | ||| Sbjct 56477 GAGCGCTGGAGGAATCGGTTTGAACGTGCATAAAATTCGGGCCA-CTGGT-TCATTGATT 56534 Query 111900 AGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 111959 || || || || || ||| |||| | |||||||| | ||||||| ||| || Sbjct 56535 AGTGGCACTAACGGCACATCCAATGGGTTGGTTCCAATGTTACGCGTATACAACAATACT 56594 Query 111960 GCGCGCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 || || || || | |||| || | || ||| | | ||| ||||||| ||| Sbjct 56595 GCTCGATACGTTGATCAAGGCGGCAATAAACGACCAGGAGCCTTTGCAATCTATCTCGAG 56654 Query 112017 CCATGGCACGCGGATATCATGGAGT 112041 |||||||| || ||||| | |||| Sbjct 56655 CCATGGCATGCAGATATTTTCGAGT 56679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620597805817200