Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014- 09-24] 18,635 sequences; 253,242,791 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2276 93.3 4e-14 >seq2276 Length=29858 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 ||||| || | ||||||| || || |||| | |||||| || | || | | |||||| Sbjct 6267 GTCGTACAACCGCTTACCTGCGAAAATCAGTCTCTGCTGATCAGGTGGGATTCCCTCCTT 6208 Query 35641 GTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700 ||| |||||| ||||| | || | | || ||| || ||||||||| | ||||| Sbjct 6207 ATCCTGGATCTTCGCCTTCACATTTTCAATAGTATCGGACGCTTCCACCTCGAGTGTGAT 6148 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 ||||||||| || | ||||||||||| || ||||| || Sbjct 6147 CGTTTTACCAGTAAGCGTTTTCACAAAGATTTGCATGCT 6109 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 ||||| || | ||||||| || || |||| | |||||| || | || | | |||||| Sbjct 6872 GTCGTACAACCGCTTACCTGCGAAAATCAGTCTCTGCTGATCAGGTGGGATTCCCTCCTT 6813 Query 35641 GTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700 ||| |||||| ||||| || | | || ||| || ||||||||| | ||||| Sbjct 6812 ATCCTGGATCTTCGCCTTCACGTTTTCAATAGTATCGGACGCTTCCACCTCGAGTGTGAT 6753 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||||||||| || | ||||||||||| || ||||||| Sbjct 6752 CGTTTTACCAGTTAGCGTTTTCACAAAGATTTGCATTC 6715 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || || | ||||||| || || || | || |||||| || | || | | |||||| || Sbjct 7471 GTGCACCAGCTTACCTGCGAAAATAAGCCTCTGCTGATCAGGTGGGATTCCCTCCTTATC 7412 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | || | | || ||| || ||||||||| | |||||||| Sbjct 7411 CTGGATCTTCGCCTTCACATTTTCAATAGTATCGGACGCTTCCACCTCGAGTGTGATCGT 7352 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||||| || | ||||||||||| || ||||||| Sbjct 7351 TTTACCAGTAAGCGTTTTCACAAAGATTTGCATTC 7317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450688593265800