Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014- 09-24] 18,635 sequences; 253,242,791 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2032 306 1e-77 seq2226 127 6e-24 seq1455 127 6e-24 seq7835 122 3e-22 seq2124 116 1e-20 seq2276 109 2e-18 seq616 86.0 2e-11 >seq2032 Length=33350 Score = 306 bits (338), Expect = 1e-77 Identities = 679/1012 (67%), Gaps = 10/1012 (1%) Strand=Plus/Minus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || || || ||||| || || || || |||||||| | ||||| || || || ||| Sbjct 5477 GACGCCGTCATTACCGTCCCCGCTTACTTTAATGACTCTCAGCGCCAAGCCACTAAGGAT 5418 Query 349667 GCTGGCAGC-ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGC 349725 || || ||| || || || | ||||| || |||| || || || || || ||||| || Sbjct 5417 GCAGG-AGCTATCGCCGGTCTTAATGTCCTTCGAATCATAAACGAGCCAACAGCTGCTGC 5359 Query 349726 AATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTT 349785 || |||||||| || || || | | || | || | |||| |||| || |||||| | Sbjct 5358 TATCGCATATGGTCTCGACAAGAAGGGTACCGGGGAGAGAAATGTTCTCATATTTGATCT 5299 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 || ||||| || ||||| || || | ||||| ||||||| || ||||| ||||| || Sbjct 5298 TGGAGGTGGAACATTTGACGTGTCCATCCTAACCATTGAAGATGGCATTTTCGAAGTGAA 5239 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 | |||||||| || || |||||||| || || || || || || || | || || Sbjct 5238 GTCTACTGCTGGAGACACGCATCTTGGAGGGGAGGACTTCGACAACCGCATGGTCAACCA 5179 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAAT 349965 ||||| ||| || || || || || | || | ||||||| | || | Sbjct 5178 CTTTGTGGCAGAGTTCAAACGAAAACACAAGAAAGACCTAAACACTAATCCTCGTGCGCT 5119 Query 349966 GCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAAC 350025 | ||||| | ||||| || ||||| ||||| ||| | | ||||| | | || | Sbjct 5118 CAGACGCCTTCGTACTGCTTGCGAACGCGCTAAACGTACACTTTCATCGTCATCGCAGGC 5059 Query 350026 CTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGC 350085 || ||||| ||||| || || ||| |||| ||||||| | ||||| ||||| Sbjct 5058 TTCCATTGAGATTGACTCACTCTTTGAAGGCATTGATTTCTACACGAACATTACCCGTGC 4999 Query 350086 TCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145 || ||||| || | ||| ||||| || | | || ||||| ||||| || || || Sbjct 4998 CCGCTTTGAGGAGCTTTGTGCCGATCTCTTCCGGTCGACCATGGACCCTGTTGAGAA-GT 4940 Query 350146 AT-TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTT 350204 | | | ||||| |||||| ||| | |||| | | || | || | ||||| |||| Sbjct 4939 CTCTTAGGGATGCCAAAATGGACAAGAGTCAGGTGAACGACATTGTACTTGTTGGAGGTT 4880 Query 350205 CTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTT 350264 | || |||||||| ||||| ||| || | || ||||| | ||| ||| ||||||| Sbjct 4879 CGACGCGTATTCCTAAAGTGCAAAAGCTTCTGTCTGATCTGTTTTCTGGAAAAGAACTGA 4820 Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTT 350324 | ||| || || ||||||||||| || || || |||||||| || ||||| | || Sbjct 4819 ACAAATCTATCAACCCAGATGAAGCAGTCGCTTACGGTGCTGCGGTGCAGGCCGCCATCC 4760 Query 350325 TATCTGGAAATAAGAGTTCTAAA---ATTGATGATCTATTACTACTAGATGTAACTCCAC 350381 | || || |||| ||| || | | ||||| |||| || ||||| |||||| Sbjct 4759 TTTCAGGCGATAA---ATCTGAAGCGGTCCAAGATCTTCTACTTCTTGATGTCGCTCCAC 4703 Query 350382 TTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTA 350441 | |||||||| | || ||| |||| | || ||||||| | | ||| || || | | Sbjct 4702 TCTCGCTTGGTATTGAGACTGCTGGAGGTGTTATGACTGCTTTGATTAAGAGGAACACCA 4643 Query 350442 CTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAA 350501 | | ||||| || | |||||| || | |||| | || || ||||||| |||| Sbjct 4642 CAATCCCTACGAAGACAAGCCAAACGTTCACGACATACTCCGACAACCAGCCAGGGGTAT 4583 Query 350502 CAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAAT 350561 || || || |||||||| ||||| || || ||||| ||||| ||||| | | Sbjct 4582 TGATCCAGGTCTTTGAAGGAGAACGAGCGATGACGAAAGACAATAACCTTCTTGGGAAGT 4523 Query 350562 TTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGT 350613 | || || |||||| ||| || | ||||| || |||||||| || Sbjct 4522 TCGAGCTGTCTGGAATTCCGCCAGCTCCACGTGGAGTGCCACAGATTGAGGT 4471 >seq2226 Length=30398 Score = 127 bits (140), Expect = 6e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||| |||||||||||||||||||| ||||| || || ||||| ||||| || || ||| Sbjct 22486 CCAGCGAAGATTAGACGTTGCTGATCGGGAGGTATACCCTCTTTGTCCTGTATCTTCGCT 22427 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | ||| |||| ||||| ||||| || | |||||||| || || Sbjct 22426 TTAACATTTTCGATGGTATCCGATGCCTCAACCTCAAGAGTGATGGTCTTTCCAGTAAGA 22367 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || |||||||| ||||| Sbjct 22366 GTCTTCACAAAAATTTGCAT 22347 >seq1455 Length=44427 Score = 127 bits (140), Expect = 6e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || ||||||||||| ||||||||||| ||||| || |||||||| ||| Sbjct 401 CCAGCAAAGATCAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 460 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || |||| ||||||| || || || || || | ||||| || || || Sbjct 461 TTCACGTTCTCTATCGTGTCAGATGCCTCGACCTCGAGGGTGATGGTCTTACCAGTAAGA 520 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||| || ||||||||||| Sbjct 521 GTTTTCACGAAAATCTGCAT 540 Score = 122 bits (134), Expect = 3e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || ||||||||||| ||||||||||| ||||| || |||||||| ||| Sbjct 93 CCAGCAAAGATCAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 152 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || |||| ||||||| || || || || || | |||||||| || || Sbjct 153 TTCACGTTCTCTATCGTGTCAGATGCCTCGACCTCGAGGGTGATGGTCTTTCCCGTAAGC 212 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || || || |||||||| Sbjct 213 GTCTTCACGAATATCTGCAT 232 >seq7835 Length=5652 Score = 122 bits (134), Expect = 3e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || ||||||||||| ||||||||||| ||||| || |||||||| ||| Sbjct 4216 CCAGCAAAGATCAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 4275 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || |||| ||||||| || || || || || | |||||||| || || Sbjct 4276 TTCACGTTCTCTATCGTGTCAGATGCCTCGACCTCGAGGGTGATGGTCTTTCCCGTAAGC 4335 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || || || |||||||| Sbjct 4336 GTCTTCACGAATATCTGCAT 4355 Score = 122 bits (134), Expect = 3e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || ||||||||||| ||||||||||| ||||| || |||||||| ||| Sbjct 4524 CCAGCAAAGATCAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 4583 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || |||| ||||||| || || || || || | |||||||| || || Sbjct 4584 TTCACGTTCTCTATCGTGTCAGATGCCTCGACCTCGAGGGTGATGGTCTTTCCCGTAAGC 4643 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || || || |||||||| Sbjct 4644 GTCTTGACGAATATCTGCAT 4663 Score = 122 bits (134), Expect = 3e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || ||||||||||| ||||||||||| ||||| || |||||||| ||| Sbjct 4832 CCAGCAAAGATCAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 4891 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || |||| ||||||| || || || || || | |||||||| || || Sbjct 4892 TTCACGTTCTCTATCGTGTCAGATGCCTCGACCTCGAGGGTGATGGTCTTTCCCGTAAGC 4951 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || || || |||||||| Sbjct 4952 GTCTTCACGAATATCTGCAT 4971 Score = 122 bits (134), Expect = 3e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || ||||||||||| ||||||||||| ||||| || |||||||| ||| Sbjct 5140 CCAGCAAAGATCAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 5199 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || |||| ||||||| || || || || || | |||||||| || || Sbjct 5200 TTCACGTTCTCTATCGTGTCAGATGCCTCGACCTCGAGGGTGATGGTCTTTCCCGTAAGC 5259 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || || || |||||||| Sbjct 5260 GTCTTCACGAATATCTGCAT 5279 Score = 111 bits (122), Expect = 5e-19 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || ||||||||||| ||||||||||| ||||| || |||||||| ||| Sbjct 5448 CCAGCAAAGATCAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 5507 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || |||| ||||||| || || || || || | |||||||| || || Sbjct 5508 TTCACGTTCTCTATCGTGTCAGATGCCTCGACCTCGAGGGTGATGGTCTTTCCCGTAAGC 5567 Query 140718 GTTTTTACAAA 140728 || || || || Sbjct 5568 GTCTTCACGAA 5578 >seq2124 Length=31866 Score = 116 bits (128), Expect = 1e-20 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 349520 AAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCT 349579 |||||||| || ||||| || || | ||||| | | ||||||||||| ||||| Sbjct 25438 AAACAATTCACCCCTGAAGAGATCTCGGCTATGGTGCTGGGAAAAATGAAGGAGATTGCG 25497 Query 349580 GAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAAT 349639 || ||||| | || | || | |||||||| | ||||| ||||| || || || Sbjct 25498 GAGTCATATCTTGGAAAGGAGGTGAAGCATGCTGTTGTCACTGTCCCAGCGTACTTCAAC 25557 Query 349640 GATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGA 349699 ||||| || ||| || ||||| |||||||| | ||||| || |||| || | || Sbjct 25558 GATGCGCAACGTCAAGCCACAAAGGATGCTGGGACGATTGCTGGCCTAAACGTCGTGCGA 25617 Query 349700 ATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAA 349746 || || || || || |||||||| || || |||||||| |||||||| Sbjct 25618 ATAATCAACGAGCCTACTGCTGCTGCCATCGCATATGGTCTTGATAA 25664 Score = 100 bits (110), Expect = 9e-16 Identities = 136/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 350132 CCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTT 350191 |||||| | ||||| ||| ||||| || | | ||| | ||| || |||| | || Sbjct 26183 CCTGTGCAGAAAGTCTTAGAAGATTCAGATCTTAAGAAAGAGCAGGTTCATGAGATTGTA 26242 Query 350192 TTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT--TTA 350249 |||| || ||||| || || ||||| ||||| || || | |||| || ||| ||| Sbjct 26243 CTAGTCGGAGGTTCCACTCGCATTCCCAAAGTGCAGCAACT--TATCAAAGATTTCTTTA 26300 Query 350250 ATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTG 350309 |||| |||||||| ||| | || || |||||||| || ||||| ||||||||||| | Sbjct 26301 ATGGAAAAGAACCGTCTCGTGGTATCAACCCAGATGAGGCAGTTGCTTATGGTGCTGCCG 26360 Query 350310 TTCAGGCA 350317 | |||||| Sbjct 26361 TCCAGGCA 26368 Score = 98.7 bits (108), Expect = 3e-15 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 183252 GCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCT 183311 || || || || |||||||| ||||| || ||||||||||| || |||||| |||| Sbjct 26367 GCCTGGACGGCAGCACCATAAGCAACTGCCTCATCTGGGTTGATACCACGAGACGGTTCT 26308 Query 183312 TTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCG 183371 || |||||||| || ||| | | ||| || | ||| ||||| | ||| ||||| ||| Sbjct 26307 TTTCCATTAAAGAAATCTTTGATAAGTTGCTGCACTTTGGGAATGCGAGTGGAACCTCCG 26248 Query 183372 ACTAATACTACTTCATCGATATTACT-TTTACTAATTTGTGAATCTTTTAAAACTTTTTC 183430 |||| ||| | |||| || | || ||| ||| | |||||||| ||| ||||| | Sbjct 26247 ACTAGTACAATCTCAT-GAACCTGCTCTTTCTTAAGATCTGAATCTTCTAAGACTTTCTG 26189 Query 183431 AACAGG 183436 ||||| Sbjct 26188 CACAGG 26183 >seq2276 Length=29858 Score = 109 bits (120), Expect = 2e-18 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 140616 TGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAA 140675 || ||||| || || |||||||||||||||||||| || || |||||||| ||||| | | Sbjct 6534 TGTTGATCTGGTGGGATTCCTTCTTTATCCTGAATCTTTGCCTTTACATTCTCAATTGTA 6475 Query 140676 TCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGC 140735 || || | ||| ||||| || |||| ||||| || || || ||||| ||||| || ||| Sbjct 6474 TCCGAGGCTTCCACTTCGAGAGTAATGGTCTTCCCAGTCAGAGTTTTCACAAAGATTTGC 6415 Query 140736 ATT 140738 ||| Sbjct 6414 ATT 6412 Score = 109 bits (120), Expect = 2e-18 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 140616 TGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAA 140675 || ||||| || || |||||||||||||||||||| || || |||||||| ||||| | | Sbjct 7139 TGTTGATCTGGTGGGATTCCTTCTTTATCCTGAATCTTTGCCTTTACATTCTCAATTGTA 7080 Query 140676 TCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGC 140735 || || | ||| ||||| || |||| ||||| || || || ||||| ||||| || ||| Sbjct 7079 TCCGAGGCTTCCACTTCGAGAGTAATGGTCTTCCCAGTCAGAGTTTTCACAAAGATTTGC 7020 Query 140736 ATT 140738 ||| Sbjct 7019 ATT 7017 Score = 109 bits (120), Expect = 2e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || || || || | ||| |||||||| || || || || ||||||||||||||||| Sbjct 7763 TTACCCGCGAAAATCAAACGCTGCTGATCTGGTGGGATCCCCTCTTTATCCTGAATTTTT 7704 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 | || ||||| ||||| | ||||| | ||||| || | ||| | |||||||| || Sbjct 7703 GTCTTCACATTCTCAATGGTGTCAGAGGCCTCAACCTCTAATGTTATGGTCTTTCCCGTA 7644 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 || ||||||||||| |||||||| Sbjct 7643 AGCGTTTTTACAAATATCTGCAT 7621 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || || || || || | ||||||||||| || ||||| || |||||||| || || Sbjct 6859 TTACCTGCGAAAATCAGTCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTC 6800 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || || || ||||| | ||| || | ||| || || ||||| | || || || ||| Sbjct 6799 GCCTTCACGTTTTCAATAGTATCGGACGCTTCCACCTCGAGTGTGATCGTTTTACCAGTT 6740 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 || ||||| ||||| || |||||| Sbjct 6739 AGCGTTTTCACAAAGATTTGCATT 6716 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || || || || || | ||||||||||| || ||||| || |||||||| || || Sbjct 7461 TTACCTGCGAAAATAAGCCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTC 7402 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| ||||| | ||| || | ||| || || ||||| | || || || || Sbjct 7401 GCCTTCACATTTTCAATAGTATCGGACGCTTCCACCTCGAGTGTGATCGTTTTACCAGTA 7342 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 || ||||| ||||| || |||||| Sbjct 7341 AGCGTTTTCACAAAGATTTGCATT 7318 Score = 91.5 bits (100), Expect = 4e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || || || || || | ||||||||||| || ||||| || |||||||| || || Sbjct 6254 TTACCTGCGAAAATCAGTCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTC 6195 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| ||||| | ||| || | ||| || || ||||| | || || || || Sbjct 6194 GCCTTCACATTTTCAATAGTATCGGACGCTTCCACCTCGAGTGTGATCGTTTTACCAGTA 6135 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 || ||||| ||||| || ||||| Sbjct 6134 AGCGTTTTCACAAAGATTTGCAT 6112 >seq616 Length=79441 Score = 86.0 bits (94), Expect = 2e-11 Identities = 203/302 (67%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 || |||| |||||||| || || || |||||| || ||| |||| | ||||| || Sbjct 56611 TGATCAACGTATCGAGCAGTATTGTTGTATACGCGTAACATTGGAACCAACCCATTGGAT 56552 Query 206509 GTTCCATTTGTTCCTCTAAT--ATGACTGCCAGTCCCTCTAATATTATGTATATGTAATC 206566 || || || || || ||||| |||| ||||| | | ||| ||||| | | || | Sbjct 56551 GTGCCGTTAGTGCCACTAATCAATGAA--CCAGTGGCCCGAATTTTATGCACGTTCAAAC 56494 Query 206567 CAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCAT 206626 | |||||||| || | || || || |||||||| || | ||||| ||||| || Sbjct 56493 CGATTCCTCCAGCGCTCTTCGATATTAGAGCACATTGCTTCAGTGTATCGTAAATACCCG 56434 Query 206627 CAACACTATCACTTTC-CATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTT 206685 ||| ||| || | ||| | | | |||||| || | ||| || | | ||||| Sbjct 56433 CAATCGAATC-CTCACTCATCGTCAACAGAAAACACGATGAAAGTTGCGGCCATAGCGTT 56375 Query 206686 CCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATTATAA 206745 ||||||||||| | || || | ||||| || ||||| || | ||||| ||| || Sbjct 56374 CCAGCATTAAACATTGTTGGTGATGCATGAGTGAAATACCGTTCACTCATTAGATTGTAC 56315 Query 206746 GT 206747 || Sbjct 56314 GT 56313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514892616438905