Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014- 09-24] 18,635 sequences; 253,242,791 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq616 170 3e-37 >seq616 Length=79441 Score = 170 bits (188), Expect = 3e-37 Identities = 301/439 (69%), Gaps = 0/439 (0%) Strand=Plus/Minus Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751 |||| | |||||| | ||||||||| || ||||| || || | | || |||||||||| Sbjct 56679 ACTCGAAAATATCTGCATGCCATGGCTCGAGATAGATTGCAAAGGCTCCTGGTCGTTTAT 56620 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 | || || ||||| | |||| ||||| || || || || | |||||||||| | | Sbjct 56619 TGCCGCCTTGATCAACGTATCGAGCAGTATTGTTGTATACGCGTAACATTGGAACCAACC 56560 Query 76812 CGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAG 76871 | || ||||| || || || ||| ||| | ||| || ||||| ||| | Sbjct 56559 CATTGGATGTGCCGTTAGTGCCACTAATCAATGAACCAGTGGCCCGAATTTTATGCACGT 56500 Query 76872 ATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGA 76931 | || |||||||| || | || || ||||||||||| | |||| ||| || || | Sbjct 56499 TCAAACCGATTCCTCCAGCGCTCTTCGATATTAGAGCACATTGCTTCAGTGTATCGTAAA 56440 Query 76932 TGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAA 76991 | ||| | || ||| || |||| | | |||||||| || | ||| | | Sbjct 56439 TACCCGCAATCGAATCCTCACTCATCGTCAACAGAAAACACGATGAAAGTTGCGGCCATA 56380 Query 76992 CAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGAT 77051 ||||| |||||||||| ||| || |||||||||||||| | |||| | ||||| Sbjct 56379 GCGTTCCAGCATTAAACATTGTTGGTGATGCATGAGTGAAATACCGTTCACTCATTAGAT 56320 Query 77052 TGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCA 77111 |||| ||||| ||| |||| || |||||| |||||| || || || || ||||| | Sbjct 56319 TGTACGTTTCGATAGCTGCATCGATATCCTCACCATGAATACCGACCGCTACCCGCATAA 56260 Query 77112 ACATATGCTGAGGTCGTTC 77130 ||| || || |||| ||| Sbjct 56259 GCATGTGTTGTGGTCTTTC 56241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712768330843200