Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201
4-09-24] 6,384 sequences; 262,782,696 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq109 127 2e-24
>seq109
Length=251363
Score = 127 bits (140), Expect = 2e-24
Identities = 292/440 (66%), Gaps = 0/440 (0%)
Strand=Plus/Plus
Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189
|||||| | |||||| || || | || || | | | |||| || ||||| || || ||
Sbjct 60330 AATATCTGCATGCCATGGCTCGAGATAGATTGCAAAAGCTCCTGGTCGTTTATTGCCGCC 60389
Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249
||||| | ||||| ||| || || || || || | |||||||||| | ||||||||
Sbjct 60390 TTGATCAACGTATCGAGCAGTATTGTTGTATACGCGTAACATTGGAACCAACCCATTGGA 60449
Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309
|| || || || ||| || | ||| |||| ||||| ||| | | |||
Sbjct 60450 TGTGCCGTTTGTGCCGCCAATCAAAGAACCAGTGGCCCGAATTTTATGTACGTTCAAACC 60509
Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369
|| || || || | || || |||| || ||| | || || |||||||| || || |
Sbjct 60510 GATTCCTCCAGCACTCTTCGATATTAGAGCACATTGCTTCAATGTATCATAAATACCGGC 60569
Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429
|| ||| || |||| | | |||||||| || | || | | |||||
Sbjct 60570 AATCGAATCCTCACTCATCGTCAACAGAAAACATGATGAAAGCTGCGGCCATAGTGTTCC 60629
Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489
|| ||||| | || || || || || || || || |||| | ||||||||||||
Sbjct 60630 AGCGTTAAACATTGTTGGTGATGCATGAGTGAAATATCGTTCACTCATTAGATTGTACGT 60689
Query 54490 CTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 54549
|| ||||||| || |||||| |||||| || || || || ||||| | ||||||
Sbjct 60690 TTCAATAGCTGCATCGATATCCTCGCCATGAATACCGACCGCAACCCGCATAAGCATGTG 60749
Query 54550 CTGAGGTCTTTCAACGATCT 54569
|| |||| |||| ||| ||
Sbjct 60750 TTGTGGTCGTTCAGCGACCT 60769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593674221016320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |