Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq109 165 2e-35 >seq109 Length=251363 Score = 165 bits (182), Expect = 2e-35 Identities = 305/442 (69%), Gaps = 4/442 (1%) Strand=Plus/Minus Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||||| || || || ||| | ||||| ||||| | ||||| ||| || |||| | || Sbjct 60762 TGAACGACCACAACACATGCTTATGCGGGTTGCGGTCGGTATTCATGGCGAGGATATCGA 60703 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAAC 363566 ||| || |||||||| || || || | |||| || ||||| || || | ||||| Sbjct 60702 TGCAGCTATTGAAACGTACAATCTAATGAGTGAACGATATTTCACTCATGCATCACCAAC 60643 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 ||||| || |||||||| | || ||| | || || || ||||| | | |||| Sbjct 60642 AATGTTTAACGCTGGAACACTATGGCCGCAGCTTTCATCATGTTTTCTGTTGACGATGAG 60583 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 || ||||| || | ||||| | ||| ||| | ||| | |||||||| || || |||| Sbjct 60582 TGAGGATTCGATTGCCGGTATTTATGATACATTGAAGCAATGTGCTCTAATATCGAAGAG 60523 Query 363687 TGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744 ||| || ||||| ||| | | || | || || |||| || || | || ||| || Sbjct 60522 TGCTGGAGGAATCGGTTTGAACG-TACATAAAATTCGGGCCACTGGTTCTTTG-ATTGGC 60465 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 |||||| || || |||||| ||||||| ||| | || || | |||||||||| Sbjct 60464 GGCACAAACGGCACATCCAATGGGTTGGTTCCAATGTTACGCGTATACAACAATACTGCT 60405 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | ||||| || || || || || || ||| || ||||| || ||||||||||| Sbjct 60404 CGATACGTTGATCAAGGCGGCAATAAACGACCAGGAGCTTTTGCAATCTATCTCGAGCCA 60345 Query 363865 CATCATGCCGATATTTTTGAGT 363886 ||||| |||||||| |||| Sbjct 60344 TGGCATGCAGATATTTTCGAGT 60323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303246992192288