Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq822 82.4 7e-11 >seq822 Length=101035 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || || ||| | ||||| ||||||||||| || || || ||||| || ||| |||||| Sbjct 47215 TTACCCGCGAAAATCAAACGCTGCTGATCTGGTGGGATTCCCTCTTTATCCTGGATTTTT 47156 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||| | | || | |||||||| | ||| ||||| | || | || || || || Sbjct 47155 GTCTTCACATTCTCAATGGTGTCCGAAGCCTCAACTTCTAATGTTATGGTCTTTCCCGTA 47096 Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| |||||||| Sbjct 47095 AGCGTTTTTACAAATATCTGCAT 47073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475462855036160